BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14562 (UTR included)
(1615 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1H06 1168 0.0
BF01053A2C05 823 0.0
>BF01059A1H06
Length = 784
Score = 1168 bits (589), Expect = 0.0
Identities = 609/617 (98%)
Strand = Plus / Plus
Query: 492 ggttctgcaatggaaacggaatcaagtaaagaatgtccgacttccgagaccaaggaggga 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttctgcaatggaaacggaatcaagtaaagaatgtccgacttccgagaccaaggaggga 180
Query: 552 tcacttactgctgcccaaagggctcggctggagcggaacaagagtagggcactcgcactg 611
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 tcacttacagctgcccaaagggctcggctggagcggaacaagagtagagcactcgcactg 240
Query: 612 agagaagctcgtcttgtcaagcgcccaacagaagacaagaacgaccgcatcgaaaagaag 671
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagaagctcgtctcgtcaagcgcccaacagaagacaagaacgaccgcatcgaaaagaag 300
Query: 672 tcgatgcgtccggtggactccggcggcggcttcctgctggaggcagaggaggacgtggcg 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgatgcgtccggtggactccggcggcggcttcctgctggaggcagaggaggacgtggcg 360
Query: 732 acccccgcgccccgcgccccgcctgcgcccatcgtgcaccgccccgaccagccgcgctgc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acccccgcgccccgcgccccgcctgcgcccatcgtgcaccgccccgaccagccgcgctgc 420
Query: 792 cttcactgcggctcgccctttccgcagtcctatctgttggacaccttcgattacaacgcc 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttcactgcggctcgccctttccgcagtcctatctgttggacaccttcgattacaacgcc 480
Query: 852 tgcgacgcctgcagggacgacgaggacaaacatgagctgatcacccggacggaggccaag 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcgacgcctgcagggacgacgaggacaaacatgagctgatcacccggacggaggccaag 540
Query: 912 agcgagttcctgctgaaggactgcgacctggacgctcggccgccgccgctgaggtgtgta 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcgagttcctgctgaaggactgcgacctggacgctcggccgccgccgctgaggtgtgta 600
Query: 972 aggcgccgaaacccgcaccgcgcgcgcttcgccgagatgagactgtacctgcgcgtgcag 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggcgccgaaacccgcaccgcgcgcgcttcgccgagatgagactgtacctgcgcgtgcag 660
Query: 1032 gtggagcagcgcgccctcgaggtgtggggctccgaggagcagctacggcgggaacgggag 1091
|||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||
Sbjct: 661 gtggagcagcgcgccctcgaggtgtggggctccgnnnancagctgcggcgggaacgggag 720
Query: 1092 gagcgggacaggcgccg 1108
|||||||||||||||||
Sbjct: 721 gagcgggacaggcgccg 737
Score = 228 bits (115), Expect = 2e-59
Identities = 122/123 (99%), Gaps = 1/123 (0%)
Strand = Plus / Plus
Query: 100 ataagttaataacaaaatactgactgttgttattgagattgaaaggaattatttatttaa 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataagttaataacaaaatactgactgttgttattgagattgaaaggaattatttatttaa 60
Query: 160 tt-aatttaaatttccaagtaattgctatttaagttgaattttttatatcttgatctcag 218
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaatttaaatttccaagtaattgctatttaagttgaattttttatatcttgatctcag 120
Query: 219 ggt 221
|||
Sbjct: 121 ggt 123
>BF01053A2C05
Length = 664
Score = 823 bits (415), Expect = 0.0
Identities = 419/421 (99%)
Strand = Plus / Minus
Query: 1164 aacgcactacacgagaccgtgcacgcgagagaaagtgacaaatgcgaatgtccgttgaca 1223
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 664 aacgcactacacgagaccgtgcacgcgagagaaagtgacaaatgcgaatgtccgnngaca 605
Query: 1224 tagacagtatttactattcttataaataaagtattaaatctaagaagagaagatgttcac 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tagacagtatttactattcttataaataaagtattaaatctaagaagagaagatgttcac 545
Query: 1284 cattcaccgtcatgacgccgacgtcgccgaccgctttccaaacaaatataaatcaatgga 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cattcaccgtcatgacgccgacgtcgccgaccgctttccaaacaaatataaatcaatgga 485
Query: 1344 atgactattgaaacataatttccacctttcgtaagctggctcttggtcccggacgggccc 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atgactattgaaacataatttccacctttcgtaagctggctcttggtcccggacgggccc 425
Query: 1404 ggctctcacagtcatagttccttgtctgaactaggagttctattctcctccacgaggtcg 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggctctcacagtcatagttccttgtctgaactaggagttctattctcctccacgaggtcg 365
Query: 1464 gtgtcatgttgatgaatggtttgtatcttttagacagatttcaaatcttccggtagatca 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtgtcatgttgatgaatggtttgtatcttttagacagatttcaaatcttccggtagatca 305
Query: 1524 tttttgggatgtttgttttcaaagtgttgcttgtaagtttttgggtccggcatttgagcc 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tttttgggatgtttgttttcaaagtgttgcttgtaagtttttgggtccggcatttgagcc 245
Query: 1584 t 1584
|
Sbjct: 244 t 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,216
Number of extensions: 3867
Number of successful extensions: 3867
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3864
Number of HSP's successfully gapped: 3
Length of query: 1615
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1598
Effective length of database: 8,119,229
Effective search space: 12974527942
Effective search space used: 12974527942
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)