BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14569 (UTR included)
(2446 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A2E01 1407 0.0
BF01018A2C10 910 0.0
BF01055B2F03 105 3e-22
BF01029A1A09 96 3e-19
>BF01039A2E01
Length = 813
Score = 1407 bits (710), Expect = 0.0
Identities = 735/741 (99%), Gaps = 3/741 (0%)
Strand = Plus / Plus
Query: 1689 gagggtagagccaccaacgacgaccgcgtgctggccaccgctctcaacctgcaggcgaat 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagggtagagccaccaacgacgaccgcgtgctggccaccgctctcaacctgcaggcgaat 60
Query: 1749 ctcacagctgacggagcggaggtccgggcggacggcggctgtgttcgcgtggtggtgttg 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcacagctgacggagcggaggtccgggcggacggcggctgtgttcgcgtggtggtgttg 120
Query: 1809 gtgacggacgaccgcaacctgcgcgtgaaggctttgtcggcagacctgccagccaaggac 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgacggacgaccgcaacctgcgcgtgaaggctttgtcggcagacctgccagccaaggac 180
Query: 1869 ctgctgtcattcgcgcagtgggcgggactgcacgctgatacgaaacccaagtcggacgcc 1928
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 ctgctgtcattcgcgcagtgggcgggactgcacgctgatacgaaacccaagtcggaagcc 240
Query: 1929 cgcagtgccgatgtttaacgttagaggcacttaaaacacgttcagctcatatttatgaag 1988
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 cgcagtgccgatgtttaacgttagaggcacttaaaacacattcagctcatatttatgaag 300
Query: 1989 ttaattaattgtactcgatgtgatttcgtaacgggacgaggcggtcgtcgttcccagagc 2048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaattaattgtactcgatgtgatttcgtaacgggacgaggcggtcgtcgttcccagagc 360
Query: 2049 atgcgcgtccgaatcagcggtccgaatggagctacggaacccttatgacgagacgcgcat 2108
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 atgcgcgtccgaatcagcggtccgaacggagctacggaacccttatgacgagacgcgcat 420
Query: 2109 gtattgtgaacgcgggtgtagttttagcatacaatcagtttagttgctatgatttatcct 2168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtattgtgaacgcgggtgtagttttagcatacaatcagtttagttgctatgatttatcct 480
Query: 2169 cagaggcgttaatcgaatgcgtttaattctaggataggaattgaatagaataagtaaaaa 2228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagaggcgttaatcgaatgcgtttaattctaggataggaattgaatagaataagtaaaaa 540
Query: 2229 ttaatacaccaatagagagatataatgttgattgaacatttttttttttaaagagcttta 2288
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 541 ttaatacaccaatagagagatataatgttgattgaacatttttttttt--aagagcttta 598
Query: 2289 ggattccaccctcgtgttcctgggcgccgttcttcattgtgaattatatttttcggtaat 2348
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ggattccaccctcgtgttcctgggcgccgttcttcattgtgaattatatttttcggtaa- 657
Query: 2349 ttttttttaattattttcctaatttcgattatactatcaggtaggtgtcgctgagctatt 2408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ttttttttaattattttcctaatttcgattatactatcaggtaggtgtcgctgagctatt 717
Query: 2409 ttttatgtactcttttttttt 2429
|||||||||||||||||||||
Sbjct: 718 ttttatgtactcttttttttt 738
>BF01018A2C10
Length = 695
Score = 910 bits (459), Expect = 0.0
Identities = 468/471 (99%)
Strand = Plus / Plus
Query: 585 ggtagtaacggcgaggagcgctcggcttggttagaatgcgctttaggtgtgtccttgcta 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ggtagtaacggcgaggagcgctcggcttggttagaatgcgctttaggtgtgtccttgcta 284
Query: 645 atgttcggtgcgctgctcgagaggtgctgcgcgctgctacccgagccgcagcacacccag 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atgttcggtgcgctgctcgagaggtgctgcgcgctgctacccgagccgcagcacacccag 344
Query: 705 cagcacgctgatgcattgcttcttctgcctgccattaagatgtggtcggactggatgtta 764
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cagcacgctgatgcactgcttcttctgcctgccattaagatgtggtcggactggatgtta 404
Query: 765 tgtcatagcagtatttggaatccgccacctagttttgacaatttcgaattagaaagcgaa 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgtcatagcagtatttggaatccgccacctagttttgacaatttcgaattagaaagcgaa 464
Query: 825 aacgatccttgggattggctcgcgaagcttatgaacatattggaagcccttgacgacaaa 884
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aacgatccttgggattggcttgcgaagcttatgaacatattggaagcccttgacgacaaa 524
Query: 885 tcattagaatttgagaacgaaccgaaggaaggatatattcccgtaaggctgccggaggat 944
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 525 tcattagaatttgagaacgaaccgaaggaaggatatatccccgtaaggctgccggaggat 584
Query: 945 gcttccctcgctgggttcacgccgctcatgtacatggagccggcgctggcgcacgtggcg 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gcttccctcgctgggttcacgccgctcatgtacatggagccggcgctggcgcacgtggcg 644
Query: 1005 ccgcacgcgcacgtcgcgcctcacgccgctgaacacgcgctgcgcatgcgc 1055
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ccgcacgcgcacgtcgcgcctcacgccgctgaacacgcgctgcgcatgcgc 695
>BF01055B2F03
Length = 776
Score = 105 bits (53), Expect = 3e-22
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 476 tgattgccctgatgttaggatagcaatgccattccatagcttgtgtggtatcaggaatct 535
||||||||| || || || ||||| ||||||||||||||| |||||||| |||||| |||
Sbjct: 569 tgattgccccgacgtaagcatagccatgccattccatagcgtgtgtggtgtcaggagtct 628
Query: 536 tctggttcacacggcttggtgttcgttccgaggagtcagcggcgtcact 584
||||||||| |||| |||||| |||||| ||||||||||||||||||
Sbjct: 629 cctggttcacgcggcgcggtgttggttccgcggagtcagcggcgtcact 677
>BF01029A1A09
Length = 732
Score = 95.6 bits (48), Expect = 3e-19
Identities = 90/102 (88%), Gaps = 4/102 (3%)
Strand = Plus / Minus
Query: 370 aattatatagggtggcaaccagaggttccagggaaactacgaatcttac--gtatgtgta 427
||||||||| |||||||||| ||||||||||| |||||||||| | ||| ||||| ||
Sbjct: 114 aattatataaggtggcaaccggaggttccaggaaaactacgaaacatacttatatgtata 55
Query: 428 ttataat--aagaattacatattaaaacttataacctatacc 467
||||||| || ||||||||||||||||||||||||||||||
Sbjct: 54 ttataataaaaaaattacatattaaaacttataacctatacc 13
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,707
Number of extensions: 22529
Number of successful extensions: 22529
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 22524
Number of HSP's successfully gapped: 4
Length of query: 2446
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2429
Effective length of database: 8,119,229
Effective search space: 19721607241
Effective search space used: 19721607241
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)