BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14573 (UTR included)
(1588 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A2A02 1336 0.0
>BF01005A2A02
Length = 731
Score = 1336 bits (674), Expect = 0.0
Identities = 686/690 (99%)
Strand = Plus / Minus
Query: 595 tagacaaatggacgccacacactaaaagtagatgggtggcgtcttttcttcttctagtaa 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tagacaaatggacgccacacactaaaagtagatgggtggcgtcttttcttcttctagtaa 672
Query: 655 tatttatcttgcgaatattcttaaaacaaggctggtatatagtcacatacgcattaggaa 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tatttatcttgcgaatattcttaaaacaaggctggtatatagtcacatacgcattaggaa 612
Query: 715 tatatcacttaaatctgtttattgcattcctcacaccaaaaatcgatcctgctatggact 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tatatcacttaaatctgtttattgcattcctcacaccaaaaatcgatcctgctatggact 552
Query: 775 ttgatgcagaagacgaaaatggtccagccctgcctacaagagcatctgaagaatttagac 834
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 551 ttgatgcagaagacgaaaacggtccagctctgcctacaagagcatctgaagaatttagac 492
Query: 835 cattcataaggaggctgccggaattcaagttttggttatccgtcaccaagagcacgttaa 894
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 491 cattcataaggaggctgccggaattcaagttttggttatccgtcaccaaaagcacgttaa 432
Query: 895 taggctttttctgtacatttatcgatgcctttaatatacctgtattttggcctatactag 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 taggctttttctgtacatttatcgatgcctttaatatacctgtattttggcctatactag 372
Query: 955 taatgtatttcattaccttattctgcctaaccatgaagagacaaattaagcatatgatta 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taatgtatttcattaccttattctgcctaaccatgaagagacaaattaagcatatgatta 312
Query: 1015 aatatcgctacctgccattcactcacaacaaaccaaaatacagaaccgtggattcatctg 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aatatcgctacctgccattcactcacaacaaaccaaaatacagaaccgtggattcatctg 252
Query: 1075 tgactgtaaattgatggtgtttgaatgattcacatagtaataataacattatgaaatatc 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgactgtaaattgatggtgtttgaatgattcacatagtaataataacattatgaaatatc 192
Query: 1135 taagtaatataaaactgttgtacggatatgattttagaaatacagttcttattgtaatgt 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 taagtaatataaaactgttgtacggatatgattttagaaatacagttcttattgtaatgt 132
Query: 1195 tttttttttattttattatttattacttatactttagtataactttgttcagaccaattt 1254
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 131 tttttttttattttattatttattacttatactttagtataattttgttcagaccaattt 72
Query: 1255 atatgtaattaataaagtttattggaaaat 1284
||||||||||||||||||||||||||||||
Sbjct: 71 atatgtaattaataaagtttattggaaaat 42
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,574
Number of extensions: 22601
Number of successful extensions: 22601
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22601
Number of HSP's successfully gapped: 1
Length of query: 1588
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1571
Effective length of database: 8,119,229
Effective search space: 12755308759
Effective search space used: 12755308759
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)