BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14588 (UTR included)
(3490 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_608_C1 1576 0.0
BF01037A1H01 1322 0.0
BF01039B1B10 333 1e-90
BF01051A2A11 200 1e-50
>BF14_608_C1
Length = 796
Score = 1576 bits (795), Expect = 0.0
Identities = 795/795 (100%)
Strand = Plus / Plus
Query: 448 ctaagaagtttcttaatttcgagtttttgtatccattgtatcattaatttacaatgggta 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctaagaagtttcttaatttcgagtttttgtatccattgtatcattaatttacaatgggta 61
Query: 508 gagaaagaagcgcagaacgtcgacgatctcgttctcgagataggcgtgagagggaccgtc 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gagaaagaagcgcagaacgtcgacgatctcgttctcgagataggcgtgagagggaccgtc 121
Query: 568 acgatgaccgcgatacttataaagataaattaaaacgacgtgatagatccagaagcccga 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acgatgaccgcgatacttataaagataaattaaaacgacgtgatagatccagaagcccga 181
Query: 628 ggaaagaaaaatcccgtagtccttcgaaaaaggaatcagacgttcgctctcgtagcccaa 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggaaagaaaaatcccgtagtccttcgaaaaaggaatcagacgttcgctctcgtagcccaa 241
Query: 688 gaagagaaaaagagcgttccagaagtccgattcgtaaagaacgcgcccgctctagaagtc 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaagagaaaaagagcgttccagaagtccgattcgtaaagaacgcgcccgctctagaagtc 301
Query: 748 cacgtaaacgtgatggcaaagataaagaccggcggccagatgacagagagaagaataaaa 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cacgtaaacgtgatggcaaagataaagaccggcggccagatgacagagagaagaataaaa 361
Query: 808 ctaaaaaggaagaagagaaaacagaggaagaacccaaaatggaagaagaacctaagcccg 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctaaaaaggaagaagagaaaacagaggaagaacccaaaatggaagaagaacctaagcccg 421
Query: 868 taaaacgagagcctctatctctagaagagttactcgccaaaaagaaggctgaagaagagg 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 taaaacgagagcctctatctctagaagagttactcgccaaaaagaaggctgaagaagagg 481
Query: 928 cgcgaagtaaaccagtattcttaacaaaggaacaacgagcagccttggcactcgaaagac 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cgcgaagtaaaccagtattcttaacaaaggaacaacgagcagccttggcactcgaaagac 541
Query: 988 gcagagaacaagttgaagccatgagagctgctgaacgaccagctgcggtggcgacgatag 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcagagaacaagttgaagccatgagagctgctgaacgaccagctgcggtggcgacgatag 601
Query: 1048 atcttacaggaacttcaaagaaggatgatgaaaaaaaataccgtgacgacagggaaaaag 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atcttacaggaacttcaaagaaggatgatgaaaaaaaataccgtgacgacagggaaaaag 661
Query: 1108 aaagggaacacgacaaagagcgagaaagagaaagagagcgagaaagagagaaagaaagag 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aaagggaacacgacaaagagcgagaaagagaaagagagcgagaaagagagaaagaaagag 721
Query: 1168 aaagaagacacgaagagagaaaatcaggggccgatcgtaatagagatgataaaaaagaga 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aaagaagacacgaagagagaaaatcaggggccgatcgtaatagagatgataaaaaagaga 781
Query: 1228 aaaatgaagaataca 1242
|||||||||||||||
Sbjct: 782 aaaatgaagaataca 796
>BF01037A1H01
Length = 704
Score = 1322 bits (667), Expect = 0.0
Identities = 676/680 (99%)
Strand = Plus / Plus
Query: 1596 cactggtcggagaaagatcaagatgagatgacagagagagattggagaatcttcagagag 1655
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 cactggtcnnngaaagatcaagatgagatgacagagagagattggagaatcttcagagag 84
Query: 1656 gattacaatattactttgaaaggtggaagaatacctaatccgattcgttcatggaaagaa 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gattacaatattactttgaaaggtggaagaatacctaatccgattcgttcatggaaagaa 144
Query: 1716 gctaactttcatgaagatattatggagatcattagcaaagttggctacaaaagccctaca 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gctaactttcatgaagatattatggagatcattagcaaagttggctacaaaagccctaca 204
Query: 1776 cctattcaacgacaagccattccaattggtcttcaaaatagggacataattggtgtagct 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cctattcaacgacaagccattccaattggtcttcaaaatagggacataattggtgtagct 264
Query: 1836 gaaactggttctggtaaaacattagcatttctcataccactgcttacttggatacagtct 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaactggttctggtaaaacattagcatttctcataccactgcttacttggatacagtct 324
Query: 1896 ttgcctaaaaatgagaggatggaagatgctgatcaaggtccgtatgctataattctggcc 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcctaaaaatgagaggatggaagatgctgatcaaggtccgtatgctataattctggcc 384
Query: 1956 ccaactcgtgaattggcacaacaaattgaggaagaaacaaataagttcggtataccgctt 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaactcgtgaattggcacaacaaattgaggaagaaacaaataagttcggtataccgctt 444
Query: 2016 ggtataacatctgtcgttgttgtgggaggtctgtcgagggaggagcaaggattcaagtta 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtataacatctgtcgttgttgtgggaggtctgtcgagggaggagcaaggattcaagtta 504
Query: 2076 cgtctaggatgtgagatcgtcatcgccacgccgggtcgtctcatagacgtattagaaaat 2135
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 cgtctaggatgtgagatcgtcatcgccacgccgggtcgtcttatagacgtattagaaaat 564
Query: 2136 cgatatcttgtgctcaatcgctgcacttatgtggttcttgacgaagccgatcgtatgata 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cgatatcttgtgctcaatcgctgcacttatgtggttcttgacgaagccgatcgtatgata 624
Query: 2196 gacatgggtttcgaacctgatgtacaaaaaattctcgaatacatgcccgtgtctaacata 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacatgggtttcgaacctgatgtacaaaaaattctcgaatacatgcccgtgtctaacata 684
Query: 2256 aaacccgacacagatgctgc 2275
||||||||||||||||||||
Sbjct: 685 aaacccgacacagatgctgc 704
>BF01039B1B10
Length = 738
Score = 333 bits (168), Expect = 1e-90
Identities = 177/181 (97%)
Strand = Plus / Minus
Query: 1 taaggatatcttcagctttccgagatctaatcttatatttcaaaatcacgtatgttacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaggatatcttcagctttccgagatctaatcttatatttcaaaatcacgtatgttacac 122
Query: 61 caacaaaacctacagcgatcgccgatgttataacgatttttgacttcgccatattatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacaaaacctacagcgatcgccgatgttataacgatttttgacttcgccatattatact 62
Query: 121 gttatgtatgtattggaataatgttaaatagtttaaacttaataataataaaaataatta 180
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 61 gttatgtatgtattggaattatgttaaatannntaaacttaataataataaaaataatta 2
Query: 181 t 181
|
Sbjct: 1 t 1
>BF01051A2A11
Length = 868
Score = 200 bits (101), Expect = 1e-50
Identities = 127/136 (93%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 3358 aaaaaaagcctttttaataatagttttttttt---agcattctattatgatgcataataa 3414
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 848 aaaaaaagcctttttaataatagttttttttttttagcattctattatgatgcataataa 789
Query: 3415 aaaaatatactgcatcatcatagtgattttagagatatttgacaaagttttcaaaatgag 3474
|||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 788 aaaaatatactgcatcattatagtgannntagagatattttacaaagtattcaaaatgag 729
Query: 3475 aacattttatttttta 3490
||||||||||||||||
Sbjct: 728 aacattttatttttta 713
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 447,288
Number of extensions: 9271
Number of successful extensions: 9271
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 9262
Number of HSP's successfully gapped: 4
Length of query: 3490
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3472
Effective length of database: 8,109,745
Effective search space: 28157034640
Effective search space used: 28157034640
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)