BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14589 (UTR included)
(1330 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1H11 745 0.0
>BF01043B1H11
Length = 684
Score = 745 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Plus
Query: 567 gtggtgagaatgatggcaatcatgcaggataggaacagttccgaggtgccgcgggagttc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtggtgagaatgatggcaatcatgcaggataggaacagttccgaggtgccgcgggagttc 368
Query: 627 ttggagacgggtcggacggggcggaggaacgccatgccggacatcctacacccccagggg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttggagacgggtcggacggggcggaggaacgccatgccggacatcctacacccccagggg 428
Query: 687 gcggaggtgaccaccgctgacctaccttcgcggctccaacagctcgtcaccactgatcca 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcggaggtgaccaccgctgacctaccttcgcggctccaacagctcgtcaccactgatcca 488
Query: 747 gataaccctcagccgggcacatctaagagcgaccttgatccagccagcgctgacgtcact 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gataaccctcagccgggcacatctaagagcgaccttgatccagccagcgctgacgtcact 548
Query: 807 gagaaaaaagacagctgtagttgaactgtccaaaaacaatcccggatctagctggtctca 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gagaaaaaagacagctgtagttgaactgtccaaaaacaatcccggatctagctggtctca 608
Query: 867 tacaaagtatatgtaatctcaatcagctatatagtattacttagcacttggtagaactag 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tacaaagtatatgtaatctcaatcagctatatagtattacttagcacttggtagaactag 668
Query: 927 gtgcatacaaatgtag 942
||||||||||||||||
Sbjct: 669 gtgcatacaaatgtag 684
Score = 363 bits (183), Expect = e-100
Identities = 208/215 (96%), Gaps = 1/215 (0%)
Strand = Plus / Plus
Query: 240 agcccccagtttcatttta-atttcactctttactctttgtctttcccgtacgtccctgt 298
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agcccccagtttcattttatatttcactctttactctttgtctttcccgtacgtccctgt 71
Query: 299 aagaattcatataattttgttgtttgtttctatcacttcgtaaattaatataaactcgtt 358
|||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 72 aagaattccaattattttgttgtttgtttcaatcacttcgtaaattaatataaactcctt 131
Query: 359 tcgtacatcacattagcataccggctaggagtgactttaaattgttcaagatctttagtg 418
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tcgtacatcacattagtataccggctaggagtgactttaaattgttcaagatctttagtg 191
Query: 419 aacgtgcacagggaacgatcaattgttttgaatgg 453
|||||||||||||||||||||||||||||||||||
Sbjct: 192 aacgtgcacagggaacgatcaattgttttgaatgg 226
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,333
Number of extensions: 39980
Number of successful extensions: 39980
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 39979
Number of HSP's successfully gapped: 2
Length of query: 1330
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1313
Effective length of database: 8,119,229
Effective search space: 10660547677
Effective search space used: 10660547677
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)