BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14614 (UTR included)
(1963 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1C09 1372 0.0
>BF01019A1C09
Length = 709
Score = 1372 bits (692), Expect = 0.0
Identities = 705/709 (99%), Gaps = 1/709 (0%)
Strand = Plus / Plus
Query: 1141 ataaaggacttcaacgatactcgccgcttgcggatcctctcgtccaaggtaacgcattag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggacttcaacgatactcgccgcttgcggatcctctcgtccaaggtaacgcattag 60
Query: 1201 gcggttcaggttggtgcatttttgtttacaatatcggtgccgatacagaagaaagtgtgc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcggttcaggttggtgcatttttgtttacaatatcggtgccgatacagaagaaagtgtgc 120
Query: 1261 tatggcagctgtttggccccttcggagccgttcagagtgttaaaattataagagatccca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatggcagctgtttggccccttcggagccgttcagagtgttaaaattataagagatccca 180
Query: 1321 ccaccaacaagtgcaaaggctacggtttcgttactatgaccaactacgacgaggctgtag 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaccaacaagtgcaaaggctacggtttcgttactatgaccaactacgacgaggctgtag 240
Query: 1381 ttgccatccagtcattgaatggctattccctcaatggacaagtgctgcaagtcagcttca 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgccatccagtcattgaatggctattccctcaatggacaagtgctgcaagtcagcttca 300
Query: 1441 aaacaaacaagagtaaatcctaaactctttaaaatctagtcaataaattgtagctaatgg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacaaacaagagtaaatcctaaactctttaaaatctagtcaataaattgtagctaatgg 360
Query: 1501 aaaatgttgatcattactctgtcatggtgttatcatggtgtcgtccgtgttaatgatggt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaatgttgatcattactctgtcatggtgttatcatggtgtcgtccgtgttaatgatggt 420
Query: 1561 attgatggagagtgatgatgtaaatcatgacatgacaccaatttttaaaccagtgttcat 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgatggagagtgatgatgtaaatcatgacatgacaccaatttttaaaccagtgttcat 480
Query: 1621 aaagtacaaaccatctattttcacataagtaacatcacagtatttgtaagtctatatata 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagtacaaaccatctattttcacataagtaacatcacagtatttgtaagtctatatata 540
Query: 1681 actctcccactatatacaatttatgtacttaaatgtaaaagacgccagtttgtggctagc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actctcccactatatacaatttatgtacttaaatgtaaaagacgccagtttgtggctagc 600
Query: 1741 tgaatccaaatctctgagaggtttataatttgaacgata-tttctgttcctacaactgcc 1799
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 tgaatcnnnatctctgagaggtttataatttgaacgatattttctgttcctacaactgcc 660
Query: 1800 tcgtaacctttgaaatgcttagtggcaatagaatgtaaaatttactctg 1848
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcgtaacctttgaaatgcttagtggcaatagaatgtaaaatttactctg 709
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 202,279
Number of extensions: 3398
Number of successful extensions: 3398
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3397
Number of HSP's successfully gapped: 1
Length of query: 1963
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1946
Effective length of database: 8,119,229
Effective search space: 15800019634
Effective search space used: 15800019634
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)