BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14649 (UTR included)
(2719 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A1F09 1526 0.0
>BF01044A1F09
Length = 819
Score = 1526 bits (770), Expect = 0.0
Identities = 796/805 (98%)
Strand = Plus / Plus
Query: 1270 tcatcatgggaggaggtcgtcgtgaatttttaccaaatgttacatctccattgacgaatt 1329
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13 tcatcatgggaggaggtcgtcgtgaatttttaccaaatattacatctccattgacgaatt 72
Query: 1330 cgacaggcagaagacgagatggagtggatctcacagagctgtggcatcaggataaattgg 1389
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 73 cgacatgcagaagacgagatggagtggatctcacagagctgtggcatcaagataaattgg 132
Query: 1390 aaagaaacgcaacacatcaatatgtcaccgagaggaatgagctaatgaaagtcttcgaat 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aaagaaacgcaacacatcaatatgtcaccgagaggaatgagctaatgaaagtcttcgaat 192
Query: 1450 cagatgatttgccggaatacctactaggattgttccaagatgatcatatggattaccact 1509
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cagatgttttgccggaatacctactaggattgttccaagatgatcatatggattaccact 252
Query: 1510 tacaagctaaggaccaaccaaccctcgaagagatggtggaagtcgccattaaagtgctat 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tacaagctaaggaccaaccaaccctcgaagagatggtggaagtcgccattaaagtgctat 312
Query: 1570 caaggagctcaaagggatactttttgtttgttgaaggtggaaggatcgaccacgcccatc 1629
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 caaggagttcaaagggatactttttgtttgttgaaggtggaaggatcgaccacgcccatc 372
Query: 1630 acgatagctatgcctacttggccctagacgaaaccatagaatattcgaaggcagtacaaa 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acgatagctatgcctacttggccctagacgaaaccatagaatattcgaaggcagtacaaa 432
Query: 1690 aagcaaaatccctaacaaatgaaacggacacattgatagttgttagctcagatcacgcac 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aagcaaaatccctaacaaatgaaacggacacattgatagttgttagctcagatcacgcac 492
Query: 1750 acactatgacagtagctggttacccctccaggggtaacgatattctgggtcttgtggatg 1809
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acacgatgacagtagctggttacccctccaggggtaacgatattctgggtcttgtggatg 552
Query: 1810 cagctcatgggtcagatggcaagccatacacaacaataagttacgccaacggtaaagcca 1869
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cagctcaagggtcagatggcaagccatacacaacaataagttacgccaacggtaaagcca 612
Query: 1870 cgtctatcactgataaaggaagagtagatttgtctttggaaagcgatttcaagaacagga 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgtctatcactgataaaggaagagtagatttgtctttggaaagcgatttcaagaacagga 672
Query: 1930 aattggactattcttatccaagtttggttccgttggactccgaaacccacgggggtgagg 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aattggactattcttatccaagtttggttccgttggactccgaaacccacgggggtgagg 732
Query: 1990 atgttgctgttttcgcgagtggaccctggcagcatctgttcacatccagctacgagcagt 2049
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 733 atgttgctgttttcgccagtggaccctggcagcatctgttcacatccagctacgngcagt 792
Query: 2050 ccgctataccacatttcatgagttt 2074
|||||||||||||||||||||||||
Sbjct: 793 ccgctataccacatttcatgagttt 817
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,112
Number of extensions: 7329
Number of successful extensions: 7329
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7329
Number of HSP's successfully gapped: 1
Length of query: 2719
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2702
Effective length of database: 8,119,229
Effective search space: 21938156758
Effective search space used: 21938156758
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)