BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14657 (UTR included)
(3280 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_925_C1 1489 0.0
>BF14_925_C1
Length = 787
Score = 1489 bits (751), Expect = 0.0
Identities = 778/787 (98%)
Strand = Plus / Plus
Query: 340 gttatgttgatgttgactgacgatacagttacataaaagtactaaaacctaattagattt 399
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 1 gttatgttgatgttgactgacgatacagttacataaaagtactaaaacctaacttgattt 60
Query: 400 attttaaattcttttaattgatacatttatgcacaatatttgctacccattatacgctgg 459
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 61 attttaaattcttttaattgatacatttatgcaaaatatttgctacccattatacgctcg 120
Query: 460 gaataaattataccttttaggacaaattgaatttccgaaaaatgactaatgcaactatac 519
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 gaataaattatatcttttaggacaaattgaatttccgaaacatgactaatgcaactatac 180
Query: 520 aggaaatagagggcatagacgattactgggggccagcattcaggtcggtgtatgaaggtg 579
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 aggaaatagagggcatagatgattactgggggccagcgttcaggtcggtgtatgaaggtg 240
Query: 580 aaggcggccatgaggcatttgtgcagcaactggacgagaggatccagcaacacgataaag 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggcggccatgaggcatttgtgcagcaactggacgagaggatccagcaacacgataaag 300
Query: 640 aaattgaaaagctgtgtaacttttactatcagggtttcatagactctatcagagagctgc 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaattgaaaagctgtgtaacttttactatcagggtttcatagactctatcagagagctgc 360
Query: 700 ttcaagtgcggtctcacgctgaggaactgcattcagagatatccaacgttgatgccaatg 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaagtgcggtctcacgctgaggaactgcattcagagatatccaacgttgatgccaatg 420
Query: 760 ttaaggaatcctcggaaagtctctgcaatagagctgaggaactgattagggcgcgtagag 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttaaggaatcctcggaaagtctctgcaatagagctgaggaactgattagggcgcgtagag 480
Query: 820 ttgaactgaacattgcatctactatagagaaaatggagttatgtctgcccttgctcacta 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaactgaacattgcatctactatagagaaaatggagttatgtctgcccttgctcacta 540
Query: 880 cttactctaagctcaagacacaggttgaagccaagagatattatccagcattgaaaacat 939
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttactccaagctcaagacacaggttgaagccaagagatattatccagcattgaaaacat 600
Query: 940 tggaacagctagagcatgtcctgctgccgagggtgggtccatataaatggtgttcacaaa 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggaacagctagagcatgtcctgctgccgagggtgggtccatataaatggtgttcacaaa 660
Query: 1000 tatcagccgacataccgaagctaaggcagtctatacaggatgcatcgatggctgatctga 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatcagccgacataccgaagctaaggcagtctatacaggatgcatcgatggctgatctga 720
Query: 1060 gggattttcttgaaaatatacggaagttgagcccgcaggtgggagctttggctttgaaac 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggattttcttgaaaatatacggaagttgagcccgcaggtgggagctttggctttgaaac 780
Query: 1120 aaactca 1126
|||||||
Sbjct: 781 aaactca 787
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,409
Number of extensions: 6854
Number of successful extensions: 6854
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6852
Number of HSP's successfully gapped: 1
Length of query: 3280
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3262
Effective length of database: 8,109,745
Effective search space: 26453988190
Effective search space used: 26453988190
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)