BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14663 (UTR included)
(1270 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 163 8e-40
BF01049A2D11 94 6e-19
>BF14_729_C3
Length = 2041
Score = 163 bits (82), Expect = 8e-40
Identities = 148/170 (87%)
Strand = Plus / Plus
Query: 570 caagcgggtgtatacaaacttgtttgtgactgtgctttgtcaaacattggacggacaaag 629
|||||||||||||||||||| | |||||||||| |||||| ||||||||| ||| |||
Sbjct: 1128 caagcgggtgtatacaaactcgactgtgactgtggcttgtcatacattggacagacgaag 1187
Query: 630 aggagcatcgatacaagggtgaaggaacgtgtctcagacattaaaaataggcgctcgtcg 689
|||||||||| |||||| || ||||||| |||||||||| ||||| |||||| |||||
Sbjct: 1188 aggagcatcggtacaagagttaaggaacacatctcagacatcaaaaacaggcgcgcgtcg 1247
Query: 690 aagacagcagtgtgggaacacataatggacaaatcaggccacaacattcg 739
||| |||||||||| ||||||| |||||||||| |||||||| |||||||
Sbjct: 1248 aagtcagcagtgtgtgaacacacaatggacaaaccaggccactacattcg 1297
>BF01049A2D11
Length = 776
Score = 93.7 bits (47), Expect = 6e-19
Identities = 114/135 (84%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 606 ttgtcaaacattggacggacaaagaggagcatcgatacaagggtgaaggaacgtgtctca 665
|||||| ||||||||| ||||||||||||||||||||||||||| || |||| |||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 666 gacatta-aaaataggcgctcgtcgaagacagcagtgtgggaacacataatggacaaatc 724
|| || | ||||||| | | |||||| ||||||| || ||||||| |||||||||| |
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 725 aggccacaacattcg 739
||||||| |||||||
Sbjct: 734 aggccactacattcg 748
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 155,449
Number of extensions: 3104
Number of successful extensions: 3104
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3104
Number of HSP's successfully gapped: 2
Length of query: 1270
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1253
Effective length of database: 8,119,229
Effective search space: 10173393937
Effective search space used: 10173393937
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)