BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14711 (UTR included)
(1963 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3191_C1 1368 0.0
>BF14_3191_C1
Length = 812
Score = 1368 bits (690), Expect = 0.0
Identities = 702/706 (99%)
Strand = Plus / Plus
Query: 528 agttcttccccgaagctagtcattgataatgacgctggtgctgatgatgcaatggcaata 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 agttcttccccgaagctagtcattgataatgacgctggtgctgatgatgcaatggcaata 166
Query: 588 tttatggctctactgtttgaaagacatcttaatggcccaaaactggtcgcattaacaacg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tttatggctctactgtttgaaagacatcttaatggcccaaaactggtcgcattaacaacg 226
Query: 648 ggaaatgggaacacaaacgaggacaatgtctgtagaaataatcaacgtattcttaaagta 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ggaaatgggaacacaaacgaggacaatgtctgtagaaataatcaacgtattcttaaagta 286
Query: 708 gctaaaagacaagatgtcccaatttatagaggttctaaagcctccctcgtaactactcca 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gctaaaagacaagatgtcccaatttatagaggttctaaagcctccctcgtaactactcca 346
Query: 768 ccaattactgactatttcggagtcgatggtctgggagatgtaggtgataatgacactgat 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ccaattactgactatttcggagtcgatggtctgggagatgtaggtgataatgacactgat 406
Query: 828 cttactcctgcacaaggacaaaatgccatcttagctttaatcgagttatcgaagttacat 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cttactcctgcacaaggacaaaatgccatcttagctttaatcgagttatcgaagttacat 466
Query: 888 gaaggacaattgattgtcatcacaattggaacattaactaatgtagcaatggccatccag 947
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaaggacaattaattgtcatcacaattggaacattaactaatgtagcaatggccatccag 526
Query: 948 ttggacccaagctttatatcgagattgcaacacttgtatattggggcaggtcatatacaa 1007
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttggacccaagctttatatcaagattgcaacacttgtatattggggcaggtcatatacaa 586
Query: 1008 agtgaacaggaatcagaaccggagttcaatgctcacatggacgtagaagcctaccatata 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 agtgaacaggaatcagaaccggagttcaatgctcacatggacgtagaagcctaccatata 646
Query: 1068 gtagcgcagcatgcaacaccagacaaagttacatttttacccttttcacaagtcaagcaa 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gtagcgcagcatgcaacaccagacaaagttacatttttacccttttcacaagtcaagcaa 706
Query: 1128 catttaaattttacaagagaatggagagaaaacgtactcggaagtcttcagaatgagatt 1187
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 707 catttaaattttacaagagaatggagagaaaacgtactcggaagtctacagaatgagatt 766
Query: 1188 gtaaaaagtcttaatctctatgaaaggatatcattacaaaaatctg 1233
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ataaaaagtcttaatctctatgaaaggatatcattacaaaaatctg 812
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 286,221
Number of extensions: 6222
Number of successful extensions: 6222
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6222
Number of HSP's successfully gapped: 1
Length of query: 1963
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1946
Effective length of database: 8,119,229
Effective search space: 15800019634
Effective search space used: 15800019634
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)