BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14716 (UTR included)
(1420 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B2G05 272 1e-72
BF01019A1H08 90 1e-17
BF14_335_C4 84 7e-16
BF14_335_C2 84 7e-16
BF01049B1F01 78 4e-14
>BF01011B2G05
Length = 732
Score = 272 bits (137), Expect = 1e-72
Identities = 147/151 (97%)
Strand = Plus / Plus
Query: 662 gcttagtgatttttctgtgatagtgaaagatattagtgtaactaataatttacctaagga 721
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 7 gcttagtgatttttctgtgatagtgnntgatattagtgtaactaataatttacctaagga 66
Query: 722 cttcgaatctttttctttgattaaacacgtgggattagaatcgatagtggacgtgttcac 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cttcgaatctttttctttgattaaacacgtgggattagaatcgatagtggacgtgttcac 126
Query: 782 cactttgtctccttcaaggtcatataagaag 812
|||||| ||||||||||||||||||||||||
Sbjct: 127 cactttatctccttcaaggtcatataagaag 157
>BF01019A1H08
Length = 504
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 582 ttaaacctacacctgcgtcgcaagtacaaggcaccgttgaagctcctctccctgcaacgc 641
||||||||||||||| ||||||| | | |||||| |||||||||||||||||||||||||
Sbjct: 477 ttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgc 418
Query: 642 gatgg 646
|||||
Sbjct: 417 gatgg 413
>BF14_335_C4
Length = 1491
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 582 ttaaacctacacctgcgtcgcaagtacaaggcaccgttgaagctcctctccctgcaacgc 641
||||||||||||||| ||||||||| | |||||| |||||||||||||| ||||||||||
Sbjct: 1252 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgc 1310
Query: 642 gatggt 647
||||||
Sbjct: 1311 gatggt 1316
>BF14_335_C2
Length = 1827
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 350 acatatttatgtattcgcgaattttaaagcgcgttgtgatgatagagcttacagttcctt 409
|||||||| |||||||||||||||||||||||| | | | ||||||| ||| |||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 410 gggaaaccaacatccccaaagaccat 435
|| | ||||||||||||||| |||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccat 1192
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 582 ttaaacctacacctgcgtcgcaagtacaaggcaccgttgaagctcctctccctgcaacgc 641
||||||||||||||| ||||||| | | |||||| |||||||||||||||||||||||||
Sbjct: 921 ttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgc 862
Query: 642 g 642
|
Sbjct: 861 g 861
>BF01049B1F01
Length = 840
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 586 acctacacctgcgtcgcaagtacaaggcaccgttgaagctcctctccctgcaacg 640
||||||||||| ||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 641 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 157,918
Number of extensions: 2802
Number of successful extensions: 2802
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2800
Number of HSP's successfully gapped: 6
Length of query: 1420
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1403
Effective length of database: 8,119,229
Effective search space: 11391278287
Effective search space used: 11391278287
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)