BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14722 (UTR included)
(3609 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B2G04 533 e-151
>BF01048B2G04
Length = 847
Score = 533 bits (269), Expect = e-151
Identities = 281/285 (98%)
Strand = Plus / Plus
Query: 2955 gtgatatgctccatcgtaatggcgtacttttatggaaattcaatgagaaaacaaagtaag 3014
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgatatgctccatcgtaatggcgtacttttatggaaattcaatgagaaaacaaagtaaa 60
Query: 3015 aggggcaagatattgatttgtgcgacaagcaacgcggccgtcgacgagctggttatcagg 3074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggggcaagatattgatttgtgcgacaagcaacgcggccgtcgacgagctggttatcagg 120
Query: 3075 ttactgaacatgagagacactctagaggaaggtgaacgtttccgtctagtccgtgttggg 3134
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttactaaacatgagagagactctagaggaaggtgaacgtttccgtctagtccgtgttggg 180
Query: 3135 cggctggagtccatgcataaagacgtcagagacgtcagcacgcaagcaacggctcagagg 3194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggctggagtccatgcataaagacgtcagagacgtcagcacgcaagcaacggctcagagg 240
Query: 3195 gtactcatgcggagagaggactccaacagtgacgtcactaaggag 3239
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 gtactcatgcggagagaagactccaacagtgacgtcactaaggag 285
Score = 172 bits (87), Expect = 3e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 3510 agatggaaggccgagaaggcgaccgacccggccagggccgcgtactgcgacgaccgcgcg 3569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agatggaaggccgagaaggcgaccgacccggccagggccgcgtactgcgacgaccgcgcg 343
Query: 3570 aggtacttcgctagacaaatagaactg 3596
|||||||||||||||||||||||||||
Sbjct: 344 aggtacttcgctagacaaatagaactg 370
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 520,381
Number of extensions: 11123
Number of successful extensions: 11123
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11123
Number of HSP's successfully gapped: 2
Length of query: 3609
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3591
Effective length of database: 8,109,745
Effective search space: 29122094295
Effective search space used: 29122094295
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)