BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14741 (UTR included)
(1924 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050A2C06 1518 0.0
BF01034B1B02 252 2e-66
BF14_3256_C1 167 8e-41
>BF01050A2C06
Length = 789
Score = 1518 bits (766), Expect = 0.0
Identities = 778/782 (99%)
Strand = Plus / Plus
Query: 367 tttacaatttaattgaaaattgagctgctttgaagtgttaataatgtaaaaaaattatta 426
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tttacaatttcattgaaaattgagctgctttgaagtgttaataatgtaaaaaaattatta 67
Query: 427 caccgtaatctttacaaacgaacgtcctagcaatataaactcagaaaatattatcgttga 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 caccgtaatctttacaaacgaacgtcctagcaatataaactcagaaaatattatcgttga 127
Query: 487 aattattaatagaaatgaacaaaaattatgaacgatgtacccattgtaacaggcgcaagt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aattattaatagaaatgaacaaaaattatgaacgatgtacccattgtaacaggcgcaagt 187
Query: 547 ggttggctactggatgtctacgaaaatggttaaaacctatggaatgtaaacacttacaac 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggttggctactggatgtctacgaaaatggttaaaacctatggaatgtaaacacttacaac 247
Query: 607 gaagtattgatagcaaacgagatttcagtaatacagacattgtgaactgtgtttttttac 666
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 248 gaagtattgatagcaaacgagattttagtaatacagacattgtgaactgtgtttttttac 307
Query: 667 ctgatcgaaaaccgcccagtaataccaacaaatttataaagttctggaaaaataaattgt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctgatcgaaaaccgcccagtaataccaacaaatttataaagttctggaaaaataaattgt 367
Query: 727 ttatcactggtagtgtccgttcattacaaagatactttggtaataaaaatcgtgatggag 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttatcactggtagtgtccgttcattacaaagatactttggtaataaaaatcgtgatggag 427
Query: 787 agtttatgtgtgattttaacaaaacagcggatccatgcacatcaagacaaattataacag 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agtttatgtgtgattttaacaaaacagcggatccatgcacatcaagacaaattataacag 487
Query: 847 tgacaaatgaagtgaaaaaagatattttagcagaacatattactatgaagtgtaaacatt 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgacaaatgaagtgaaaaaagatattttagcagaacatattactatgaagtgtaaacatt 547
Query: 907 cagatggccactcagttcttagagggcatcatcaacatgtatcagtagagagctgtgcta 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cagatggccactcagttcttagagggcatcatcaacatgtatcagtagagagctgtgcta 607
Query: 967 tatattgtcaactctcaaaacatggctggtattggggaggaataacatccagtgaggctg 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tatattgtcaactctcaaaacatggctggtattggggaggaataacatccagtgaggctg 667
Query: 1027 aagagcttcttgcaggccaacatgacaatgtattcttggtacgagattcttatgacttaa 1086
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 668 aagagcttcttgcaggccaacatgacaatgtgttcttggtacgagattcttatgacttaa 727
Query: 1087 gacacattctctgtgtgtcatttcgatgcgttggccgaactctacatgctcgactcaggc 1146
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 728 gacacattctctgtgtgtcatttcgatgtgttggccgaactctacatgctcgactcaggc 787
Query: 1147 at 1148
||
Sbjct: 788 at 789
>BF01034B1B02
Length = 854
Score = 252 bits (127), Expect = 2e-66
Identities = 127/127 (100%)
Strand = Plus / Minus
Query: 1798 ccgttacaaaagctgctgtgagtgtttgtggtgcaacggccactggattcatattcagcg 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ccgttacaaaagctgctgtgagtgtttgtggtgcaacggccactggattcatattcagcg 719
Query: 1858 ccatctgtataaactctgcgtctctgatgcgagatttaacaaaatttcttgttgaagtgc 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ccatctgtataaactctgcgtctctgatgcgagatttaacaaaatttcttgttgaagtgc 659
Query: 1918 aattctg 1924
|||||||
Sbjct: 658 aattctg 652
Score = 155 bits (78), Expect = 3e-37
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 1632 tataacaatactgtatcatatttatcatactgttgctgaattcatttaactgtgttcatt 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tataacaatactgtatcatatttatcatactgttgctgaattcatttaactgtgttcatt 795
Query: 1692 cctaatatattctttgcc 1709
||||||||||||||||||
Sbjct: 794 cctaatatattctttgcc 777
>BF14_3256_C1
Length = 2292
Score = 167 bits (84), Expect = 8e-41
Identities = 87/88 (98%)
Strand = Plus / Minus
Query: 1 atacgattacatttcaattcactatttaaaaatatattaaattatattcacaaacaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atacgattacatttcaattcactatttaaaaatatattaaattatattcacaaacaccaa 30
Query: 61 tcaccacttttttcacgacaagtccatt 88
||||||||||||||||| ||||||||||
Sbjct: 29 tcaccacttttttcacggcaagtccatt 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,954
Number of extensions: 7475
Number of successful extensions: 7475
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7475
Number of HSP's successfully gapped: 4
Length of query: 1924
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1907
Effective length of database: 8,119,229
Effective search space: 15483369703
Effective search space used: 15483369703
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)