BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14742 (UTR included)
(2776 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012B1B09 1045 0.0
>BF01012B1B09
Length = 658
Score = 1045 bits (527), Expect = 0.0
Identities = 542/547 (99%)
Strand = Plus / Plus
Query: 725 tgaattatgtgatattgatatggacatcagtttgttatttgaagagaaccttactattgg 784
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaattctgtgatattgatatggacatcagtttgttatttgaagagaaccttactattgg 60
Query: 785 aaaaaaaatagcactaacagaaaagattgttaaagttttgccgagcatgaagtgtcctta 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaaaaatagcactaacagaaaagattgttaaagttttgccgagcatgaagtgtcctta 120
Query: 845 cattatcgaacctcatcaaatacaaggtttagattttattaatatttatccattagtaca 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cattatcgaacctcatcaaatacaaggtttagattttattaatatttatccattagtaca 180
Query: 905 atggttaattaagtattctagtgaattccgggaggcaaaagaagacgaattacgtaagtt 964
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 atggttaattaagtattctagtgaattccgggaggcaaaagaagacgagttacgtaagtt 240
Query: 965 tgctgttaagcaatataataaagatcatatatttgaacttgatcgtaaccacttccgaca 1024
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgctgttaaacagtataataaagatcatatatttgaacttgatcgtaaccacttccgaca 300
Query: 1025 aacagagaaactattgaaaaatcttgccgcagttcagaatttatataaaccatgcagagt 1084
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactgagaaactattgaaaaatcttgccgcagttcagaatttatataaaccatgcagagt 360
Query: 1085 tcgtaaacggatatctggattatctttaaatgagttggaacaagtcaatgctgtgctatc 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgtaaacggatatctggattatctttaaatgagttggaacaagtcaatgctgtgctatc 420
Query: 1145 agagtatgatacacgcatgttgatgcatgtctccaacaacaaagatgatcctcaacaaga 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagtatgatacacgcatgttgatgcatgtctccaacaacaaagatgatcctcaacaaga 480
Query: 1205 tgaggacttggagtttttatatgattatgaaaaaagtttagctgatccatcggatataac 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaggacttggagtttttatatgattatgaaaaaagtttagctgatccatcggatataac 540
Query: 1265 cactgag 1271
|||||||
Sbjct: 541 cactgag 547
Score = 91.7 bits (46), Expect = 6e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 1270 agacggaaatttaccacaatgtcaataataaagaagacgctgaaaa 1315
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agacggaaatttaccacaatgtcaataataaagaagacgctgaaaa 658
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 411,768
Number of extensions: 8880
Number of successful extensions: 8880
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8880
Number of HSP's successfully gapped: 2
Length of query: 2776
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2759
Effective length of database: 8,119,229
Effective search space: 22400952811
Effective search space used: 22400952811
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)