BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14743 (UTR included)
(2599 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3277_C1 999 0.0
>BF14_3277_C1
Length = 809
Score = 999 bits (504), Expect = 0.0
Identities = 507/508 (99%)
Strand = Plus / Minus
Query: 851 acataacgaagaattagcttcggctattgtaagactcggtgccttagaacatattgtttc 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acataacgaagaattagcttcggctattgtaagactcggtgccttagaacatattgtttc 682
Query: 911 ttgcttagaagatttcgacacgcaggtcaaggaaaatgcggcttgggcattaggttacat 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgcttagaagatttcgacacgcaggtcaaggaaaatgcggcttgggcattaggttacat 622
Query: 971 tggaaaacatagcgaacatttatcaggattagtcgtggatgctggaacactcccgctatt 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggaaaacatagcgaacatttatcaggattagtcgtggatgctggaacactcccgctatt 562
Query: 1031 ggttttggcctttcaagaaccagaaatgagtttgaaacagatagctgctggtgctttggt 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttttggcctttcaagaaccagaaatgagtttgaaacagatagctgctggtgctttggt 502
Query: 1091 agatttagcacaacacaagcctgaagccgtggtagacgcgggagctatttgtcatttagt 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatttagcacaacacaagcctgaagccgtggtagacgcgggagctatttgtcatttagt 442
Query: 1151 gcgcggcttggaaaaccaagaccctaagctaaagcgtagcacactttgcgccctgagtgc 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcgcggcttggaaaaccaagaccctaagctaaagcgtagcacactttgcgccctgagtgc 382
Query: 1211 cgtggcgggcacacgcgcggcgctggctgaggcggtagttgctggtggagccctaccgcc 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtggcgggcacacgcgcggcgctggctgaggcggtagttgctggtggagccctaccgcc 322
Query: 1271 cgccttgcttcacgccggccacgatactgcacccgttcgccgcgccgccgcctgtctatt 1330
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgccttgctccacgccggccacgatactgcacccgttcgccgcgccgccgcctgtctatt 262
Query: 1331 acgtgatatagtcaaacattccgtagac 1358
||||||||||||||||||||||||||||
Sbjct: 261 acgtgatatagtcaaacattccgtagac 234
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,707
Number of extensions: 6675
Number of successful extensions: 6675
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6675
Number of HSP's successfully gapped: 1
Length of query: 2599
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2582
Effective length of database: 8,119,229
Effective search space: 20963849278
Effective search space used: 20963849278
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)