BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14775 (UTR included)
(4000 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B2G10 1451 0.0
BF01057A1F12 111 9e-24
BF01025B2G10 72 8e-12
>BF01045B2G10
Length = 755
Score = 1451 bits (732), Expect = 0.0
Identities = 749/755 (99%)
Strand = Plus / Plus
Query: 1384 taaaacgtctcacagaggatatcgatgaatctgaacgagaatccatcgatatcgacaata 1443
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 taaaacgtctcacagaggatatcgatgaatcntaacgagaatccatcgatatcgacaata 60
Query: 1444 aactcacggataaggacagcactagcactgatacattccagtcgacagagagcaaagaat 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 aactcacggataaggacagcactagcactgatacattccagtcgacagagagcaaggaat 120
Query: 1504 ttgataaaatgcggaagattagtagggcggaaagtgatttatcgtcgctgagaaatctat 1563
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgataaaatgcggaagataagtagggcggaaagtgatttatcgtcgctgagaaatctat 180
Query: 1564 cgacgaatggtctcatgatgttcgatccattggttataaatgcggtgtcagcatcgacat 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgacgaatggtctcatgatgttcgatccattggttataaatgcggtgtcagcatcgacat 240
Query: 1624 cagaacgacaaatcccggaccaagatttagtcacatcactaaacgagcaagtaactgaaa 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagaacgacaaatcccggaccaagatttagtcacatcactaaacgagcaagtaactgaaa 300
Query: 1684 tagcggatagattatcctctatagttagtgatgtggatatacacgatcaccaaatacact 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagcggatagattatcctctatagttagtgatgtggatatacacgatcaccaaatacact 360
Query: 1744 cgttctcaacaaacgatgtcccatccttgatatcgaatgagaattctgaggattacggct 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgttctcaacaaacgatgtcccatccttgatatcgaatgagaattctgaggattacggct 420
Query: 1804 ttagtggtccaaggaacgaacagttgagttgtatgccatccactagtcatggttatttga 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttagtggtccaaggaacgaacagttgagttgtatgccatccactagtcatggttatttga 480
Query: 1864 taccaaacgctattagtcaggagcccgtagtactagcctcactctcacacaataactccg 1923
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taccaaacgctataagtcaggagcccgtagtactagcctcactctcacacaataactccg 540
Query: 1924 ctgtgttcaaccaggacgaaagcactgatattaacggcgcaatactgaactctgatctcc 1983
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 541 ctgtgttcaaccaggacgaaagcactgatattaacggcgcaatactgaactctgatcttc 600
Query: 1984 cattaatactgaccgataatattgacgctgatattgtaaatactaatatatcaatagcaa 2043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cattaatactgaccgataatattgacgctgatattgtaaatactaatatatcaatagcaa 660
Query: 2044 acgtgaatcttagttcactgttgttgacgaacgaggaattcagacagaatttcattggaa 2103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acgtgaatcttagttcactgttgttgacgaacgaggaattcagacagaatttcattggaa 720
Query: 2104 acgaaaatgacggtgacaatacaagcttccattca 2138
|||||||||||||||||||||||||||||||||||
Sbjct: 721 acgaaaatgacggtgacaatacaagcttccattca 755
>BF01057A1F12
Length = 801
Score = 111 bits (56), Expect = 9e-24
Identities = 164/200 (82%)
Strand = Plus / Plus
Query: 88 atttgtggtgctgttaggcgattattccgcttgctggtaacgacgataaatttatcctcg 147
|||||||| || |||||||| |||| ||||||||||| || || ||||| || || ||
Sbjct: 198 atttgtggggccgttaggcgtctatttcgcttgctggttaccacaataaacttgtcttca 257
Query: 148 ctagaagtggtagctctcggcctttccgatcgcaaacgatctcgataactgccagtctcc 207
|||||||| |||||||| || ||| | || ||| ||||||| ||| ||||||||| ||
Sbjct: 258 ctagaagtagtagctcttggtcttccggagcgcggacgatcttgattactgccagtttct 317
Query: 208 ttatatcggactattgtgttatgaacacaagtcttcgacaacttaagttgagaggcaatc 267
|| || || || || || |||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 318 ttgtaccgcacaatactgcgatgaacacaagtcttcgataacttgagttgagatgcaatc 377
Query: 268 gcacgttcagatttgccttc 287
|||||||||||||||||||
Sbjct: 378 tcacgttcagatttgccttc 397
>BF01025B2G10
Length = 739
Score = 71.9 bits (36), Expect = 8e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 262 gcaatcgcacgttcagatttgccttcgttgtgtaaa 297
||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcaatcgcacgttcagatttgccttcgttgtgtaaa 686
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 383,314
Number of extensions: 6836
Number of successful extensions: 6836
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6836
Number of HSP's successfully gapped: 3
Length of query: 4000
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3982
Effective length of database: 8,109,745
Effective search space: 32293004590
Effective search space used: 32293004590
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)