BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14784 (UTR included)
(1419 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 115 2e-25
BF14_335_C4 100 1e-20
BF14_335_C2 100 1e-20
BF01049B1F01 74 7e-13
BF01016A2B02 70 1e-11
>BF01019A1H08
Length = 504
Score = 115 bits (58), Expect = 2e-25
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 1209 ttagataggggcccctttaacctacaactgggtcgcaagtcccaggctctgttaaagctt 1268
||||||||| ||||||| |||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 1269 ctctcactgcaaggcgactgacccggcaccaacacggtgaatccatggaatgct 1322
||||| |||||| |||| ||||||||||| |||||||||||||| |||||||
Sbjct: 432 ctctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgct 379
>BF14_335_C4
Length = 1491
Score = 99.6 bits (50), Expect = 1e-20
Identities = 105/122 (86%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 1204 gcgcgttagataggggcccctttaacctacaactgggtcgcaagtcccaggctctgttaa 1263
|||||| ||||| |||||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct: 1232 gcgcgtaagataaaggccccttaaacctacacctgggtcgcaagtcccaggcactgttga 1291
Query: 1264 agcttctctcactgcaaggcgactgacccggcaccaacacggtgaatccatggaatgctg 1323
|||| ||||| |||||| |||| | ||| ||| | |||||||||||||||||||||||
Sbjct: 1292 agctcctctc-ctgcaacgcgatggtccccgcaaccgcacggtgaatccatggaatgctg 1350
Query: 1324 ag 1325
||
Sbjct: 1351 ag 1352
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 1e-20
Identities = 120/142 (84%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 1201 tacgcgcgttagataggggcccctttaacctacaactgggtcgcaagtcccaggctctgt 1260
|||||| ||||||||||||| | || |||||||| ||| ||||||| |||||||| ||||
Sbjct: 943 tacgcgagttagataggggctc-ttaaacctacacctgtgtcgcaaatcccaggcactgt 885
Query: 1261 taaagcttctctcactgcaaggcgactgacccggcaccaacacggtgaatccatggaatg 1320
| ||||| ||||| |||||| ||| | ||||||||||| |||||||||||||| ||| |
Sbjct: 884 tgaagctcctctccctgcaacgcggcggacccggcacccgcacggtgaatccatagaaag 825
Query: 1321 ctgagcaatttcgtctctttat 1342
|| || ||||||||||||||
Sbjct: 824 ctaagaggtttcgtctctttat 803
Score = 71.9 bits (36), Expect = 3e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 1068 ttctgtattggcgaatttaaaagcgcattgtgttaatagagcttacggttctttgggtaa 1127
||||||||| |||||||| ||||||| | | ||||||||| |||||||| |||| |
Sbjct: 1271 ttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttggaaga 1212
Query: 1128 tcaatatccccaaagaccatgccatcaaggtcaagaagta 1167
||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 1211 ccaacatccccaaaaaccatgccatcaaggtcaacaagta 1172
>BF01049B1F01
Length = 840
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 1208 gttagataggggcccctttaacctacaactgggtcgcaagtcccaggctctgttaaagct 1267
||||||||||| |||||| ||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 660 gttagataggg-ccccttacacctacacctgggtcgcaagtcccaggcactgttgaagct 602
Query: 1268 tctctcactgcaa 1280
||||| ||||||
Sbjct: 601 cctctccctgcaa 589
>BF01016A2B02
Length = 780
Score = 69.9 bits (35), Expect = 1e-11
Identities = 108/131 (82%), Gaps = 1/131 (0%)
Strand = Plus / Minus
Query: 1208 gttagataggggcccctttaacctacaactgggtcgcaagtcccaggctctgttaaagct 1267
|||||||||||||| ||| | |||||| ||| ||||||| |||||||| ||||| |||||
Sbjct: 298 gttagataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagct 239
Query: 1268 tctctcactgcaaggcgactgacccggcaccaacacggtgaatccatggaatgctgagca 1327
||||| || ||| ||| ||||||||| || |||||||||||| ||| |||| || |
Sbjct: 238 cctctcccttcaacgcgcgggacccggca-cagcacggtgaatccctgggatgcggacaa 180
Query: 1328 atttcgtctct 1338
||||||||||
Sbjct: 179 gtttcgtctct 169
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 148,922
Number of extensions: 2909
Number of successful extensions: 2909
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2906
Number of HSP's successfully gapped: 6
Length of query: 1419
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1402
Effective length of database: 8,119,229
Effective search space: 11383159058
Effective search space used: 11383159058
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)