BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14799 (UTR included)
(1354 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1492_C1 1217 0.0
>BF14_1492_C1
Length = 1449
Score = 1217 bits (614), Expect = 0.0
Identities = 629/634 (99%)
Strand = Plus / Minus
Query: 444 aaagctacgaagatattacgctacattaatagggtatcaaaagctccattttctaatatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 aaagctacgaagatattacgctacattaatagggtatcaaaagctccattttctaatatg 1290
Query: 504 gttgatcccaaaagagttgtcagttatgaagacatgcttaaagtcattcagcagcccgag 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 gttgatcccaaaagagttgtcagttatgaagacatgcttaaagtcattcagcagcccgag 1230
Query: 564 aaagtgataatagatgttagaaacccagaagaagtgaaatctactggcaagattccatcc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 aaagtgataatagatgttagaaacccagaagaagtgaaatctactggcaagattccatcc 1170
Query: 624 agcattaacattccattaaataatgttcaaaatgcactagcaacaatgtcggaggaggaa 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 agcattaacattccattaaataatgttcaaaatgcactagcaacaatgtcggaggaggaa 1110
Query: 684 tttaaaaagaagttccagagacctaagccatcctcatcggatgagttaattttttattgt 743
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1109 tttaaaaagaagttccagagacctaagccatcctcatcggatgagttaattttctattgt 1050
Query: 744 caatctgggcgtcgttcaactgaagctttggatagagcactcaaacttggatatacaaaa 803
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1049 caatctgggcgtcgttcaactgaagctttggatagagcactcaaacttggatatacgaaa 990
Query: 804 tccaagacatatttgggaagctggaatgactggtcgagcagacagcagtaaatattgaga 863
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 989 tccaagacatatttgggaagctggaatgactggtcgagcagacagcagtaaatattagga 930
Query: 864 gtcaaataaaatggcataattaaagcatattctttattccacaaccatttttattaagag 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 gtcaaataaaatggcataattaaagcatattctttattccacaaccatttttattaagag 870
Query: 924 atttttttctgtaatcactgcttgaaaattatcatgcatggttatgtaacaaaattaatt 983
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 869 atttttttctgtaatcactggttgaaaattatcatgcatggttatgtaacaaaattaatt 810
Query: 984 tttgactaggtatgtctgtgtgtaataaatattggctaaattttgttacatctttgttgc 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tttgactaggtatgtctgtgtgtaataaatattggctaaattttgttacatctttgttgc 750
Query: 1044 ccaatcggtccaactgccaacataatttttagca 1077
||||||||||||||||||||||||||||||||||
Sbjct: 749 ccaatcggtccaactgccaacataatttttagca 716
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 1293 tttttataaccaagattaaaagcattctgttgggccattccggatctttttcctatcata 1352
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 715 tttttataaccaagattaaaagcattctgttgcgccattccggatctttttcctatcata 656
Query: 1353 ca 1354
||
Sbjct: 655 ca 654
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,736
Number of extensions: 5420
Number of successful extensions: 5420
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5420
Number of HSP's successfully gapped: 2
Length of query: 1354
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1337
Effective length of database: 8,119,229
Effective search space: 10855409173
Effective search space used: 10855409173
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)