BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14800 (UTR included)
(2947 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1484_C1 525 e-148
BF14_1492_C1 234 6e-61
>BF14_1484_C1
Length = 1222
Score = 525 bits (265), Expect = e-148
Identities = 271/273 (99%)
Strand = Plus / Plus
Query: 2172 gccgagctcaggcgggcgctgcggtcgagggacgagaggctgctggctctagagggggag 2231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgagctcaggcgggcgctgcggtcgagggacgagaggctgctggctctagagggggag 60
Query: 2232 tgcgccaagtgggaacagcgctacctcgaggaggccgcactcagacaggcggcggtgtcc 2291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgccaagtgggaacagcgctacctcgaggaggccgcactcagacaggcggcggtgtcc 120
Query: 2292 gcagcatccatacccaaggacgctaagatcgcggccctggagaagacgtcggcggagtcc 2351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcagcatccatacccaaggacgctaagatcgcggccctggagaagacgtcggcggagtcc 180
Query: 2352 gagcgactgatggcagaggctcgcagcgagaagatacggcacatggacgagctgcactct 2411
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagcgactgatggcggaggctcgcagcgagaagatacggcacatggacgagctgcactcc 240
Query: 2412 gcacagaagaaggtcgccgacctggagagcagg 2444
|||||||||||||||||||||||||||||||||
Sbjct: 241 gcacagaagaaggtcgccgacctggagagcagg 273
Score = 274 bits (138), Expect = 8e-73
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 2560 gccgagctcaggcgggcgctgcggtcgagggacgagaggctgctggctctagagggggag 2619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgagctcaggcgggcgctgcggtcgagggacgagaggctgctggctctagagggggag 60
Query: 2620 tgcgccaagtgggaacagcgctacctcgaggaggccgcactcagacaggcggcggtgtcc 2679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgccaagtgggaacagcgctacctcgaggaggccgcactcagacaggcggcggtgtcc 120
Query: 2680 gcagcatccatacccaag 2697
||||||||||||||||||
Sbjct: 121 gcagcatccatacccaag 138
>BF14_1492_C1
Length = 1449
Score = 234 bits (118), Expect = 6e-61
Identities = 118/118 (100%)
Strand = Plus / Minus
Query: 1 aaatatatttaacaatacaaaatttaagaagtgattactaaactccggtagatgttaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aaatatatttaacaatacaaaatttaagaagtgattactaaactccggtagatgttaata 60
Query: 61 atggatttgagttgtaagttctattctgactagtgcgataaggattaaggactgatca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atggatttgagttgtaagttctattctgactagtgcgataaggattaaggactgatca 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,180
Number of extensions: 5698
Number of successful extensions: 5698
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5698
Number of HSP's successfully gapped: 3
Length of query: 2947
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2929
Effective length of database: 8,109,745
Effective search space: 23753443105
Effective search space used: 23753443105
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)