BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14814 (UTR included)
(4840 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A1E08 1348 0.0
>BF01048A1E08
Length = 716
Score = 1348 bits (680), Expect = 0.0
Identities = 707/716 (98%)
Strand = Plus / Plus
Query: 3057 ttatgcgatatagtaaaacaacaggagaaaaaaatatcgcaagaaacattggtcatggag 3116
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ttatgcgatatagtaaaacaacaggagaaaaccttatcgcaagaaacattggtcatggag 60
Query: 3117 aagatcttaaatacagagatccaagtttgcaagatccttggggattgcgagtatcacggc 3176
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 aagatcttaaatacagaaatccaagtttgcaagatccttggggattgcgagtaccacggc 120
Query: 3177 attacggtggataaagatctcgtgtcgagatttttgattgatgtgaaaaattctcaagag 3236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attacggtggataaagatctcgtgtcgagatttttgattgatgtgaaaaattctcaagag 180
Query: 3237 atcttacagaagaaggcatttaagatatgcggataccattttaatttcaactcatccaag 3296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcttacagaagaaggcatttaagatatgcggataccattttaatttcaactcatccaag 240
Query: 3297 gatgtagctaaagttttaggactttacaagggtcgtaagaccagcactaggaagagtgtt 3356
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 gatgtagctaaagttttaggactttacaaaggtcgtaagaccagcactaggaagagtgtt 300
Query: 3357 ctttcggcgcacaacagtcctatgtctagtattataatatactggcggaaactcaactcc 3416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctttcggcgcacaacagtcctatgtctagtattataatatactggcggaaactcaactcc 360
Query: 3417 atactcactaagagtctttatcccatcactgaacaagcctgtgtatacactgaagataat 3476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atactcactaagagtctttatcccatcactgaacaagcctgtgtatacactgaagataat 420
Query: 3477 aggatatctccatcttataccatgtacacatgcacgggacgcattagcatgcacgagccg 3536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggatatctccatcttataccatgtacacatgcacgggacgcattagcatgcacgagccg 480
Query: 3537 aatttgcaaaacttaccgcggaaattcacgataccggcaaactatttatgtgataatgaa 3596
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 481 aatttgcaaaacttaccgcggaaattcacgataccagcaaactatttatgcgataatgaa 540
Query: 3597 tcttgtgacgacgtaatagagttcaattgtaggaaaatattcagagcagcgcccggttac 3656
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcctgtgacgacgtaatagagttcaattgtaggaaaatattcagagcagcgcccggttac 600
Query: 3657 gttttcatatcggctgattactgccagttggaaatgaggattctgacacacttttccaag 3716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttttcatatcggctgattactgccagttggaaatgaggattctgacacacttttccaag 660
Query: 3717 gacgttactctaactaggataatgggttcggatgttgacgtttttaaatcgattgc 3772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacgttactctaactaggataatgggttcggatgttgacgtttttaaatcgattgc 716
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 621,338
Number of extensions: 12947
Number of successful extensions: 12947
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12947
Number of HSP's successfully gapped: 1
Length of query: 4840
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4822
Effective length of database: 8,109,745
Effective search space: 39105190390
Effective search space used: 39105190390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)