BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14828 (UTR included)
(2473 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 107 8e-23
BF14_335_C4 92 5e-18
BF01049B1F01 78 8e-14
BF14_335_C2 78 8e-14
>BF01019A1H08
Length = 504
Score = 107 bits (54), Expect = 8e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 782 ccccttaaacctacacctggctcacaagtaccaggcactgttgaagctcctcgacctgca 841
|||||||||||||||||||| || ||| | |||||||||||||||||||||| ||||||
Sbjct: 481 ccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgca 422
Query: 842 acgcgatggacccggcatccgaacgg 867
||||||||||||||||| ||| ||||
Sbjct: 421 acgcgatggacccggcacccgcacgg 396
>BF14_335_C4
Length = 1491
Score = 91.7 bits (46), Expect = 5e-18
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 782 ccccttaaacctacacctggctcacaagtaccaggcactgttgaagctcctcgacctgca 841
|||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||
Sbjct: 1248 ccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctc-tcctgca 1306
Query: 842 acgcgatggacccggcatccgaacgg 867
||||||||| ||| ||| ||| ||||
Sbjct: 1307 acgcgatggtccccgcaaccgcacgg 1332
>BF01049B1F01
Length = 840
Score = 77.8 bits (39), Expect = 8e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 782 ccccttaaacctacacctggctcacaagtaccaggcactgttgaagctcctcgacctgca 841
||||||| |||||||||||| || ||||| |||||||||||||||||||||| ||||||
Sbjct: 649 ccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
Query: 842 acg 844
|||
Sbjct: 589 acg 587
>BF14_335_C2
Length = 1827
Score = 77.8 bits (39), Expect = 8e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 785 cttaaacctacacctggctcacaagtaccaggcactgttgaagctcctcgacctgcaacg 844
|||||||||||||||| || ||| | |||||||||||||||||||||| |||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 845 cgatggacccggcatccgaacgg 867
|| |||||||||| ||| ||||
Sbjct: 862 cggcggacccggcacccgcacgg 840
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,270
Number of extensions: 9602
Number of successful extensions: 9602
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 9601
Number of HSP's successfully gapped: 4
Length of query: 2473
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2456
Effective length of database: 8,119,229
Effective search space: 19940826424
Effective search space used: 19940826424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)