BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14848 (UTR included)
(988 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A1D01 842 0.0
BF01052B1F12 72 2e-12
>BF01025A1D01
Length = 764
Score = 842 bits (425), Expect = 0.0
Identities = 439/443 (99%), Gaps = 1/443 (0%)
Strand = Plus / Minus
Query: 531 cgtcgggagcctgtaattttaataaaaattaaagcacgcgtatatccgaaaaatattagt 590
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 442 cgtcgggagcctgtaattttaacaaaa-ttaaagcacgcgtatatccgaaaaatattagt 384
Query: 591 ttcatttaaatgaatttactatactcccctgaaatgatgataggaacgacaatgacttca 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttcatttaaatgaatttactatactcccctgaaatgatgataggaacgacaatgacttca 324
Query: 651 tgttggccaagcacaggatctgttaaaattttctttaggacaccttctcttagtgtatag 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgttggccaagcacaggatctgttaaaattttctttaggacaccttctcttagtgtatag 264
Query: 711 tttgcggctgcgtggtcgctgctcatgctatcttattaaaggacgaagtaaatcatcgag 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttgcggctgcgtggtcgctgctcatgctatcttattaaaggacgaagtaaatcatcgag 204
Query: 771 tctttgttctatttgtaaccattccatgtctttgcttatcatattgacagatatttcatt 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tctttgttctatttgtaaccattccatgtctttgcttatcatattgacagatatttcatt 144
Query: 831 agatgggtttctacatctatgaattcacggaagtaaatcctttttatgtttggatgcttt 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 agatgggtttctacatctatgaattcacggaagtaaatcctttttatgtttggatgcttt 84
Query: 891 caaagcattacaattttaaactttcgaccgtataaatagtgtcgaaaatgttttgttgcc 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 caaagcattacaattttaaactttcgaccgtataaatagtgtcgaaaatgttttgttgcc 24
Query: 951 cgtactactgccagagtctcgag 973
|||||||||||||||| |||||
Sbjct: 23 cgtactactgccagagnntcgag 1
>BF01052B1F12
Length = 785
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 570 gtatatccgaaaaatattagtttcatttaaatgaat 605
||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtatatccgaaaaatattagtttcatttaaatgaat 324
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 118,059
Number of extensions: 2630
Number of successful extensions: 2630
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2629
Number of HSP's successfully gapped: 2
Length of query: 988
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 971
Effective length of database: 8,119,229
Effective search space: 7883771359
Effective search space used: 7883771359
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)