BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14856 (UTR included)
(1408 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_493_C2 1253 0.0
BF01046A1F10 668 0.0
BF14_493_C1 482 e-136
>BF14_493_C2
Length = 1669
Score = 1253 bits (632), Expect = 0.0
Identities = 665/676 (98%)
Strand = Plus / Plus
Query: 1 tcgttgtttgtaggaggtctcatgctgttcaccttctaccacgtgtaccctcacttataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tcgttgtttgtaggaggtctcatgctgttcaccttctaccacgtgtaccctcacttataa 878
Query: 61 agactgacctccacaaacatccacaacagcagtcaacacacccccgaccgagccagtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 879 agactgacctccacaaacatccacaacagcagtcaacacacccccgaccaagccagtgcc 938
Query: 121 tgtgtcatgtgcataaagccttacgttgggttaaagcatattcattaataggacatttag 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 939 tgtgtcatgtgcataaagccttacgttgggttaaagcatattcattcgtaggacatttag 998
Query: 181 agaataagaagagttggggatgtccccgcccgccgtccaacactgacccctataataaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 agaataagaagagttggggatgtccccgcccgccgtccaacactgacccctataataaac 1058
Query: 241 taagcgtatatataattttaagacttctgtgcagtacgagcgcgaacagagactcgatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 taagcgtatatataattttaagacttctgtgcagtacgagcgcgaacagagactcgatca 1118
Query: 301 tggctagcgagtggatcgtgataggcatctccggtgtcacgtgcggggggaagacgaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 tggctagcgagtggatcgtgataggcatctccggtgtcacgtgcggggggaagacgaccc 1178
Query: 361 tcgcggacaagttgaaggaggctctgcatccggtatacgtgttccaccaggacaggtact 420
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1179 tcgcggacaagttgaaggaggctctgcatccggtgtacgtgttccatcaggacaggtact 1238
Query: 421 tctacagcgacgacagtcccaagcacgtgcgctgcgagggcttggatcacaacaactacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 tctacagcgacgacagtcccaagcacgtgcgctgcgagggcttggatcacaacaactacg 1298
Query: 481 acatactgagcgcgctcgacatggacgccatgtaccgagatgtgatcagcactatgagag 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1299 acatactgagcgcgctcgacatggacgccatgtaccgagatgtgatcggcactatgagag 1358
Query: 541 gggtggatcgcgcccacagccagggtgggcgggcggtgcccgggaagttacacgcgcccg 600
||| ||| ||||||||||||||||| |||||||||| ||||||||||| |||||||||||
Sbjct: 1359 gggcggagcgcgcccacagccagggcgggcgggcggcgcccgggaagtcacacgcgcccg 1418
Query: 601 ggaagaagttcctcgtcatagagggattcaccgtgctcaactacacgcccctcatggaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 ggaagaagttcctcgtcatagagggattcaccgtgctcaactacacgcccctcatggaca 1478
Query: 661 tatgtgactacaggta 676
||||||||||||||||
Sbjct: 1479 tatgtgactacaggta 1494
Score = 119 bits (60), Expect = 1e-26
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 671 caggtactacttggttctggagtacggcgagtgtttctctcggcgcgcgctccgcctgta 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1610 caggtactacttggttctggagtacggcgagtgtttctctcggcgcgcgctccgcctgta 1669
>BF01046A1F10
Length = 783
Score = 668 bits (337), Expect = 0.0
Identities = 346/349 (99%)
Strand = Plus / Plus
Query: 1 tcgttgtttgtaggaggtctcatgctgttcaccttctaccacgtgtaccctcacttataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcgttgtttgtaggaggtctcatgctgttcaccttctaccacgtgtaccctcacttataa 494
Query: 61 agactgacctccacaaacatccacaacagcagtcaacacacccccgaccgagccagtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agactgacctccacaaacatccacaacagcagtcaacacacccccgaccgagccagtgcc 554
Query: 121 tgtgtcatgtgcataaagccttacgttgggttaaagcatattcattaataggacatttag 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 555 tgtgtcatgtgcataaagccttacgttgggttaaagcatattcattcgtaggacatttag 614
Query: 181 agaataagaagagttggggatgtccccgcccgccgtccaacactgacccctataataaac 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 615 agaataagaagagttggggatgtcctcgcccgccgtccaacactgacccctataataaac 674
Query: 241 taagcgtatatataattttaagacttctgtgcagtacgagcgcgaacagagactcgatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 taagcgtatatataattttaagacttctgtgcagtacgagcgcgaacagagactcgatca 734
Query: 301 tggctagcgagtggatcgtgataggcatctccggtgtcacgtgcggggg 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tggctagcgagtggatcgtgataggcatctccggtgtcacgtgcggggg 783
>BF14_493_C1
Length = 906
Score = 482 bits (243), Expect = e-136
Identities = 249/251 (99%)
Strand = Plus / Plus
Query: 1 tcgttgtttgtaggaggtctcatgctgttcaccttctaccacgtgtaccctcacttataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tcgttgtttgtaggaggtctcatgctgttcaccttctaccacgtgtaccctcacttataa 715
Query: 61 agactgacctccacaaacatccacaacagcagtcaacacacccccgaccgagccagtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 716 agactgacctccacaaacatccacaacagcagtcaacacacccccgaccaagccagtgcc 775
Query: 121 tgtgtcatgtgcataaagccttacgttgggttaaagcatattcattaataggacatttag 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgtgtcatgtgcataaagccatacgttgggttaaagcatattcattaataggacatttag 835
Query: 181 agaataagaagagttggggatgtccccgcccgccgtccaacactgacccctataataaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 agaataagaagagttggggatgtccccgcccgccgtccaacactgacccctataataaac 895
Query: 241 taagcgtatat 251
|||||||||||
Sbjct: 896 taagcgtatat 906
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 143,105
Number of extensions: 3045
Number of successful extensions: 3045
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3044
Number of HSP's successfully gapped: 4
Length of query: 1408
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1391
Effective length of database: 8,119,229
Effective search space: 11293847539
Effective search space used: 11293847539
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)