BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14860 (UTR included)
(1891 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3278_C1 1386 0.0
>BF14_3278_C1
Length = 767
Score = 1386 bits (699), Expect = 0.0
Identities = 714/719 (99%)
Strand = Plus / Plus
Query: 268 aggtaatgatggcggagcagaagtctctgatcctggagccggggaaggtgatcagaccga 327
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 aggtaacgatggcggagcagaagtctctgatcctggagccggggaaggtgatcagaccga 108
Query: 328 tcatagaccacgacggggtcagactcctcgccgagaggctgtacgggatatcggtgttag 387
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tcatagaccacgacggagtcagactcctcgccgagaggctgtacgggatatcggtgttag 168
Query: 388 agctggaggaactcaacggatacgatgacaagaattataaaattatagaggaccccaacg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 agctggaggaactcaacggatacgatgacaagaattataaaattatagaggaccccaacg 228
Query: 448 tcaagaacccgctgatcacgaaccacagcccgcacgggtacgttctgaagattatgaact 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tcaagaacccgctgatcacgaaccacagcccgcacgggtacgttctgaagattatgaact 288
Query: 508 ctgtagactcacagaaccttgatgttgttgaagcacaaaacgagatcatgaatttcctgg 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctgtagactcacagaaccttgatgttgttgaagcacaaaacgagatcatgaatttcctgg 348
Query: 568 gcacccggtccgtgtgttgtccgaagcccgtgcgtaacgtgttcggtcacctctactcgt 627
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 349 gcacccggtccgtgtgttgtccgaagcccgtgcgtaacgtgttcggtcacctgtactcgt 408
Query: 628 ccgagcgtgtcggtgactctcagcacgtggttcgtctcttggagtacgtacccggagtgt 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccgagcgtgtcggtgactctcagcacgtggttcgtctcttggagtacgtacccggagtgt 468
Query: 688 tgctgaaggacgctcctcacagcgaccagctctggtaccaactaggggagttcgcagcca 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tgctgaaggacgctcctcacagcgaccagctctggtaccaactaggggagttcgcagcca 528
Query: 748 acctcgtcaacaaactagagcacttcaatcactcgggcgtggtttcccgccagcacatct 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 acctcgtcaacaaactagagcacttcaatcactcgggcgtggtttcccgccagcacatct 588
Query: 808 ggatgttgagtaacgttccgcagctggagaagttcaaatacgtcatcaaggactccgagc 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ggatgttgagtaacgttccgcagctggagaagttcaaatacgtcatcaaggactccgagc 648
Query: 868 gcctggacctggtggaggaggtaattgaagagttcaagtacgcggtcatccctcagatgg 927
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gcctggacctggtcgaggaggtaattgaagagttcaagtacgcggtcatccctcagatgg 708
Query: 928 aggaacttgagaagggagtcatacatggagacatcaacgagatgaacgtactcgttggt 986
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 709 aggaacttgagaagggagtcatacatggagacatcaacgagatgaacgtacttgttggt 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,762
Number of extensions: 4503
Number of successful extensions: 4503
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4503
Number of HSP's successfully gapped: 1
Length of query: 1891
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1874
Effective length of database: 8,119,229
Effective search space: 15215435146
Effective search space used: 15215435146
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)