BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14884 (UTR included)
(1315 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 161 3e-39
BF01049B2H03 100 1e-20
BF14_1695_C1 96 2e-19
BF01061B1E05 92 3e-18
BF01044B2E12 92 3e-18
BF01012A1B09 92 3e-18
BF01012A1E04 84 6e-16
BF01011A1H06 84 6e-16
BF14_729_C2 76 2e-13
BF01052B1F12 72 2e-12
BF01025B2E05 72 2e-12
BF14_3184_C1 70 1e-11
BF14_23_C1 68 4e-11
>BF14_729_C3
Length = 2041
Score = 161 bits (81), Expect = 3e-39
Identities = 84/85 (98%)
Strand = Plus / Minus
Query: 1231 atgagatctaagattttcgcgagtattcatttaaatgaaactagtattattcggatatac 1290
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattattcggatatac 1670
Query: 1291 tacgcggattttattatttaaaaac 1315
|||||||||||||||||||||||||
Sbjct: 1669 tacgcggattttattatttaaaaac 1645
>BF01049B2H03
Length = 832
Score = 99.6 bits (50), Expect = 1e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 1229 taatgagatctaagattttcgcgagtattcatttaaatgaaactagtattattcggatat 1288
||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 354 taatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcggat-t 296
Query: 1289 actacgcggattttatta 1306
|||| ||| |||||||||
Sbjct: 295 actaagcgtattttatta 278
>BF14_1695_C1
Length = 1407
Score = 95.6 bits (48), Expect = 2e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1229 taatgagatctaagattttcgcgagtattcatttaaatgaaactagta 1276
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 taatgagatctaagattttcgcgagtattcatttaaatgaaactagta 1067
>BF01061B1E05
Length = 745
Score = 91.7 bits (46), Expect = 3e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 1232 tgagatctaagattttcgcgagtattcatttaaatgaaactagtat 1277
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tgagatctaagattttcgcgagtattcatttaaatgaaactagtat 9
>BF01044B2E12
Length = 823
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 1258 catttaaatgaaactagtattattcggatatactacgcggattttattatttaa 1311
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 85 catttaaatgaaactagtatttttcggatttactacgcggattttattatttaa 32
>BF01012A1B09
Length = 841
Score = 91.7 bits (46), Expect = 3e-18
Identities = 78/88 (88%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 1231 atgagatctaagattttcgcgagt---attcatttaaatgaaactagtattattcggata 1287
||||||||||||| | |||||||| ||||||||||||||||||| ||| ||||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
Query: 1288 tactacgcggattttattatttaaaaac 1315
||||||||||||||||||||| |||||
Sbjct: 765 cactacgcggattttattattttaaaac 792
>BF01012A1E04
Length = 841
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/76 (90%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 1232 tgagatctaagattttcgcgagt---attcatttaaatgaaactagtat-tattcggata 1287
|||||||||||| |||||||||| ||||||||||||||||||| ||| | ||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattttcggata 559
Query: 1288 tactacgcggatttta 1303
||||||||||||||||
Sbjct: 558 tactacgcggatttta 543
>BF01011A1H06
Length = 739
Score = 83.8 bits (42), Expect = 6e-16
Identities = 65/72 (90%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 1228 ttaatgagatctaagattttcgcgagt---attcatttaaatgaaactagtattattcgg 1284
||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||
Sbjct: 609 ttaatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcgg 550
Query: 1285 atatactacgcg 1296
||| ||||||||
Sbjct: 549 ataaactacgcg 538
>BF14_729_C2
Length = 1289
Score = 75.8 bits (38), Expect = 2e-13
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 1228 ttaatgagatctaagattttcgcgagtatt---catttaaatgaaactagtattattcgg 1284
|||||||||||||||| |||||| ||| || ||||||||||||||||| |||||||||
Sbjct: 677 ttaatgagatctaagactttcgccagttttaatcatttaaatgaaactagaattattcgg 618
Query: 1285 atatactacgcg 1296
||| ||||||||
Sbjct: 617 ataaactacgcg 606
>BF01052B1F12
Length = 785
Score = 71.9 bits (36), Expect = 2e-12
Identities = 68/78 (87%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 1231 atgagatctaagattttcgcgagt---attcatttaaatgaaactagtattattcggata 1287
|||| |||||||| |||||||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 297 atgaaatctaagaatttcgcgagttttattcatttaaatgaaactaatatttttcggata 356
Query: 1288 tactacgcggattttatt 1305
|||| |||| |||||||
Sbjct: 357 tacttcgcgtcttttatt 374
>BF01025B2E05
Length = 759
Score = 71.9 bits (36), Expect = 2e-12
Identities = 50/54 (92%), Gaps = 3/54 (5%)
Strand = Plus / Minus
Query: 1227 attaatgagatctaagattttcgcgagt---attcatttaaatgaaactagtat 1277
||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 123 attaatgagatctaagactttcgcgagttttattcatttaaatgaaactagtat 70
>BF14_3184_C1
Length = 1256
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1235 gatctaagattttcgcgagtattcatttaaatgaaacta 1273
||||||||||||||||||||| |||||||||||||||||
Sbjct: 14 gatctaagattttcgcgagtactcatttaaatgaaacta 52
>BF14_23_C1
Length = 1573
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1254 tattcatttaaatgaaactagtattattcggatatactacgcggattttattatttaaaa 1313
|||||||| ||||||||||||| ||| ||||| | ||||||||| ||||||| |||||||
Sbjct: 455 tattcattcaaatgaaactagttttagtcggaaacactacgcggtttttattgtttaaaa 396
Query: 1314 ac 1315
||
Sbjct: 395 ac 394
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,807
Number of extensions: 7455
Number of successful extensions: 7455
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 7449
Number of HSP's successfully gapped: 13
Length of query: 1315
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1298
Effective length of database: 8,119,229
Effective search space: 10538759242
Effective search space used: 10538759242
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)