BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14885 (UTR included)
(1855 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B2C09 896 0.0
>BF01017B2C09
Length = 694
Score = 896 bits (452), Expect = 0.0
Identities = 470/476 (98%)
Strand = Plus / Plus
Query: 332 aggtgccgcaggaaataagagacgcaaagacggtgacagtaggaagagttccatcgttga 391
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aggtgccgctggaaataagagacgcaaagacggtgacagtaggaagagttccatcgttga 278
Query: 392 aggtttcacacttagttcatcgaacaacctggcccgtctgacgtccttggcgctaactca 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aggtttcacacttagttcatcgaacaacctggcccgtctgacgtccttggcgctaactca 338
Query: 452 cttactgctggcccctggttccgctcgccttcccgcacacacgccgctacgacgtgcggc 511
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cttactgctggcccctggttctgctcgccttcccgcacacacgccgctacgacgtgcggc 398
Query: 512 cattgacctcctcgggagaggattcgctgtttgggaaccgtatctcgacgtatctcatgt 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cattgacctcctcgggagaggattcgctgtttgggaaccgtatctcgacgtatctcatgt 458
Query: 572 gctgctgggtctgttggagatgtgttcggacgctgataaattagtgccttcgatgacgta 631
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gctgctgggtctattggagatgtgttcggacgctgataaattagtgccttcgatgacgta 518
Query: 632 cggtctgcctctcacaccgcaggcggactcctgtcggaccgcgcggcacgcactcacact 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cggtctgcctctcacaccgcaggcggactcctgtcggaccgcgcggcacgcactcacact 578
Query: 692 tatagcgacagcaagaccagcggctttcataacgactatggcccgtgaggtagcgagatg 751
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 579 tatagcgacggcaagaccagcggctttcataacgactatggcccgtgaggtggcgagatg 638
Query: 752 cgctgccgcccccgcgggcgctccgcccccgcccgccgcggttgcgctacagcgag 807
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cgctgccgcccctgcgggcgctccgcccccgcccgccgcggttgcgctacagcgag 694
Score = 157 bits (79), Expect = 8e-38
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 231 ctaccgctttacactcacacggagagcatcaacccacaagcaacccagaaggaaccggct 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaccgctttacactcacacggagagcatcaacccacaagcaacccagaaggaaccggct 60
Query: 291 gagaaagtcgctaaggacc 309
|||||||||||||||||||
Sbjct: 61 gagaaagtcgctaaggacc 79
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,159
Number of extensions: 6430
Number of successful extensions: 6430
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6430
Number of HSP's successfully gapped: 2
Length of query: 1855
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1838
Effective length of database: 8,119,229
Effective search space: 14923142902
Effective search space used: 14923142902
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)