BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14889 (UTR included)
(1109 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 581 e-166
BF01049A2D11 165 2e-40
BF14_729_C1 88 3e-17
>BF14_729_C3
Length = 2041
Score = 581 bits (293), Expect = e-166
Identities = 450/501 (89%), Gaps = 1/501 (0%)
Strand = Plus / Plus
Query: 122 cccgttgtcgctgatatattcatggaggacttcgaggtgcgagccctttgctctcctcct 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cccgttgtcgctgaaatattcatggaggacttcgaggtgcgagccctttgctctcctcct 554
Query: 182 ataagacctttaatatataaacggtatgtaaatgacaccttcacaatattaaataaaaag 241
|||||||||||||| | ||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 555 ataagacctttaatttttaaacggtatgtagatgacacctttacaatattaaataaaaat 614
Query: 242 aaaacatctgcttctctgcaccatcttaattctatcaatagcaacattcagtttagtata 301
||||||||||||| |||| ||||||| ||||||||||||| || |||||||||| ||||
Sbjct: 615 aaaacatctgcttttctgaaccatctcaattctatcaataataagattcagtttactata 674
Query: 302 gaattagaggcaaataattctttagctttccttgatatgc-tgtcgttaggaatcctgac 360
||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 675 gaattggaggcaaataattctttagctttccttgatatacttgttgttaggaatcctgac 734
Query: 361 aatactttgggacatcctgtttacaagaaaaccgcacatacggataggtatttcattgtt 420
||||||||||||||| ||||||| | |||| || |||||||||| ||||| ||| || |
Sbjct: 735 aatactttgggacatactgtttataggaaacccacacatacggacaggtacctcaatggt 794
Query: 421 aacacacaaaaccaccatattcagttagctactgttggcaaatatttgttacagacagcc 480
|| |||| |||||| ||| ||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 795 tactcacaccaccaccctatccagttagctaccgttggcaaatctttgttacagagagcc 854
Query: 481 caacagctttgtgatgctgaccgtctagaagccgagctgtatcatgtaaaacatgctgtc 540
||||| |||||||||||||||| ||||| ||||||||| | ||||||||||||||| ||
Sbjct: 855 caacacctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaacatgctctc 914
Query: 541 accaccaacaacctgccctcgcctcgccagcatcgcaagcaccacttgaagccacccaca 600
|| | ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 915 actatcaacaacctgcccgtgcctcgccagcatcgcaagaaccacctgaagccacccaca 974
Query: 601 gttgagtgacaacctgcgata 621
||||| ||||||||||||||
Sbjct: 975 gttgaacgacaacctgcgata 995
Score = 414 bits (209), Expect = e-115
Identities = 372/425 (87%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 667 atctttaagatggtttcgatcaacactatatacaaaccacacaagaaagtgagccaatta 726
||||| |||| |||||| || || ||||| ||||||||||| |||||||||||||||||
Sbjct: 1035 atcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgagccaattc 1094
Query: 727 ttgagacctatcaagagtaccattcctttataacaagcggggttatacaaaatcgattgt 786
|||||||| ||||| |||| |||||||||| |||||||||| |||||||| |||| |||
Sbjct: 1095 ttgagaccaatcaaaagtaacattcctttacaacaagcgggtgtatacaaactcgactgt 1154
Query: 787 gactgtggcttgtcatacattggacagacaaagaggagcatcggcacaagggtcaagaaa 846
||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||| ||
Sbjct: 1155 gactgtggcttgtcatacattggacagacgaagaggagcatcggtacaagagttaaggaa 1214
Query: 847 catatctcagacattaaaaataggcacgcatcgaaatcagcagtatgtgaacacacaatg 906
|| ||||||||||| ||||| |||| ||| ||||| |||||||| |||||||||||||||
Sbjct: 1215 cacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatg 1274
Query: 907 gaaaaagcaggccactatattcggtttgataaaccacaaatcatcgctcgtgaagtcagc 966
|| ||| |||||||||| ||||| ||||||||||| |||||| ||||||| |||| ||
Sbjct: 1275 gacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcgggaagacaag 1334
Query: 967 tatataccgaggttaatccgcgaggctatttaaattaaaaaaacatcctaacttcaatag 1026
||||||||||| ||||| |||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 1335 tatataccgagattaattcgcgaggctattgaaatt-aaaaaacatcccaatttcaatag 1393
Query: 1027 agaagatggttagaatccacccaatacctgggaccccttccttaaaaatatacaatccca 1086
||||||||| | ||||| | | || |||||||||||| | |||||||||||| |||||||
Sbjct: 1394 agaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatccca 1453
Query: 1087 tgtcc 1091
|||||
Sbjct: 1454 tgtcc 1458
Score = 87.7 bits (44), Expect = 3e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 179 cctataagacctttaatatataaacggtatgtaaatgacaccttcacaatat 230
||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 489 cctataagacctttaatatataaacggtatgtagttgacaccttcacaatat 438
>BF01049A2D11
Length = 776
Score = 165 bits (83), Expect = 2e-40
Identities = 144/163 (88%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 796 ttgtcatacattggacagacaaagaggagcatcggcacaagggtcaagaaacatatctca 855
|||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 856 gacattaa-aaataggcacgcatcgaaatcagcagtatgtgaacacacaatggaaaaagc 914
|| || | ||||||| ||||||| |||||||||||||||||||||||||| ||| |
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 915 aggccactatattcggtttgataaaccacaaatcatcgctcgt 957
||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcgt 776
>BF14_729_C1
Length = 981
Score = 87.7 bits (44), Expect = 3e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 680 tttcgatcaacactatatacaaaccacacaagaaagtgagccaattattgagacctatca 739
|||| ||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 103 tttccatcaagactattcacaaaccacataagaaagtgagccaattcttgagacctatca 44
Query: 740 agagtaccattc 751
|||||| |||||
Sbjct: 43 agagtaacattc 32
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 116,261
Number of extensions: 2132
Number of successful extensions: 2132
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2129
Number of HSP's successfully gapped: 6
Length of query: 1109
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1092
Effective length of database: 8,119,229
Effective search space: 8866198068
Effective search space used: 8866198068
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)