BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14891 (UTR included)
(2184 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1514_C1 492 e-138
>BF14_1514_C1
Length = 820
Score = 492 bits (248), Expect = e-138
Identities = 256/259 (98%)
Strand = Plus / Plus
Query: 596 ggatgccataaacaacaacttaaccggcaacaatgacaacccgccatcttggttgccgga 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ggatgccataaacaacaacttaaccggcaacaatgacaacccgccatcttggttgccgga 621
Query: 656 tgacatgttgaatgtgaacaacatcgagccgcgggatttcaataataaattgaacgaacg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgacatgttgaatgtgaacaacatcgagccgcgggatttcaataataaattgaacgaacg 681
Query: 716 attgaatggcaacgcggaggatagggtgacggtgaagctgttgtgcggagcggatctgtt 775
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 attgaatggcaatgcggaggatagggtgacggtgaagctgttgtgcggagcggatctgtt 741
Query: 776 ggaatcattcgccactcccggactttggtcggatgaagatatggaagccatagttggtcg 835
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 742 ggaatcattcgccactcccggactttggtcggatgangatatggaagccatagttggtcg 801
Query: 836 ccacggcttggttgtggtg 854
|||||||||||| ||||||
Sbjct: 802 ccacggcttggtggtggtg 820
Score = 492 bits (248), Expect = e-138
Identities = 256/259 (98%)
Strand = Plus / Plus
Query: 917 ggatgccataaacaacaacttaaccggcaacaatgacaacccgccatcttggttgccgga 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ggatgccataaacaacaacttaaccggcaacaatgacaacccgccatcttggttgccgga 621
Query: 977 tgacatgttgaatgtgaacaacatcgagccgcgggatttcaataataaattgaacgaacg 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgacatgttgaatgtgaacaacatcgagccgcgggatttcaataataaattgaacgaacg 681
Query: 1037 attgaatggcaacgcggaggatagggtgacggtgaagctgttgtgcggagcggatctgtt 1096
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 attgaatggcaatgcggaggatagggtgacggtgaagctgttgtgcggagcggatctgtt 741
Query: 1097 ggaatcattcgccactcccggactttggtcggatgaagatatggaagccatagttggtcg 1156
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 742 ggaatcattcgccactcccggactttggtcggatgangatatggaagccatagttggtcg 801
Query: 1157 ccacggcttggttgtggtg 1175
|||||||||||| ||||||
Sbjct: 802 ccacggcttggtggtggtg 820
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,345
Number of extensions: 4030
Number of successful extensions: 4030
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4030
Number of HSP's successfully gapped: 2
Length of query: 2184
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2167
Effective length of database: 8,119,229
Effective search space: 17594369243
Effective search space used: 17594369243
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)