BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14894 (UTR included)
(1408 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B1E11 1479 0.0
>BF01042B1E11
Length = 792
Score = 1479 bits (746), Expect = 0.0
Identities = 780/792 (98%)
Strand = Plus / Plus
Query: 244 atgatacatatttatttttcgtttttgtaaccggaaaacattattgatattatttttgtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgatacatatttatttttcgtttttgtaaccggaaaacattattgatattatttttgtg 60
Query: 304 atcactataaagtaatgcatggatcaaggatcgttaaatgattttaaagtggttccggat 363
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 atcactataaagtaatgcatggatcaaggatcgttaaatgattttaaagtggctccggat 120
Query: 364 aacttaatctttgtaaacagtgtcagcctggcataatcaatttaataaaattgatcatag 423
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 121 aacttaatctttgtaaacagtgtcagcctggcttaatcaatttaataaaattgattatag 180
Query: 424 tacaatatattgaagatacagagaaatttggagtttcggtttacattaatagtgtatata 483
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacaatatattgaagatacatagaaatttggagtttcggtttacattaatagtgtatata 240
Query: 484 ataatagtcattttacaatggctatcctacacagagccttgtttacatggtttatctttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataatagtcattttacaatggctatcctacacagagccttgtttacatggtttatctttt 300
Query: 544 tagtatttttaattcttctatgcctaagattagaatccagaacgcactggaattggttta 603
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 tagtatttttaattcttctatgcctaagattagaatctagaacgcactggaattggttta 360
Query: 604 tagtatttatacccatgtgggtgtatgatagcatattactgatatatgtattatttcata 663
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 tagtatttatacccatgtgggtgtatgatagtatattactgatatatgtattatttcata 420
Query: 664 tggtgtcacactgtcgaaatggaattgagaggttcagaagtactatcaacaaaaatgtgt 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggtgtcacactgtcgaaatggaattgagaggttcagaagtactatcaacaaaaatgtgt 480
Query: 724 ggtatatagcagccataggacttaagatggctgcacaaataataatttgtataaaattag 783
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 ggtatatagcagccataggacttaagatggctgctcaaataataatttgtataaaattag 540
Query: 784 agtttactagtggttacctaccaatttatgttgtaatgacccctatatggatgttgctac 843
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 541 agtttactagtggttacctaccgatatatgttgtaatgacccctatatggatgttgctac 600
Query: 844 cagttctctgtgtagaagtgtttatgcatctaattaaacattcaagtaggagtagtaggt 903
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 601 cagttctctgtgtagaagtgtttatgcatttaattaaacattcaagtaggagtagtaggt 660
Query: 904 actaaaacattttgaatagaagccattctatctaatattaaaattaagtattttaaagta 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actaaaacattttgaatagaagccattctatctaatattaaaattaagtattttaaagta 720
Query: 964 cacatgtgacggagatatatttaaacttggcacaattccattgacattgtcagtacattt 1023
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacatgtgacggnnatatatttaaacttggcacaattccattgacattgtcagtacattt 780
Query: 1024 gcatagtattgc 1035
||||||||||||
Sbjct: 781 gcatagtattgc 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,138
Number of extensions: 3941
Number of successful extensions: 3941
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3941
Number of HSP's successfully gapped: 1
Length of query: 1408
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1391
Effective length of database: 8,119,229
Effective search space: 11293847539
Effective search space used: 11293847539
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)