BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14903 (UTR included)
(2593 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1724_C1 1185 0.0
BF01016B2E01 682 0.0
>BF14_1724_C1
Length = 1375
Score = 1185 bits (598), Expect = 0.0
Identities = 610/614 (99%)
Strand = Plus / Plus
Query: 1064 agaaagcaagaatatgacctcttctactatatctgcaaaaatatcttcgactaacctaca 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 agaaagcaagaatatgacctcttctactatatctgcaaaaatatcttcgactaacctaca 821
Query: 1124 aactttacatcgaaattcttctcacgttataactactccgccattagtattcaaaaggct 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 aactttacatcgaaattcttctcacgttataactactccgccattagtattcaaaaggct 881
Query: 1184 taaagctgcatcagcaaagattgagacggtgaacaaaactaccaaggcggatcttaacac 1243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 882 taaagctgcatcagcaaagattgaggcggtgaacaaaactaccaaggcggatcttaacac 941
Query: 1244 taacataacagataaaggtatagcaacaattaaaactactgaaaaacctgtgaaaatgcc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 taacataacagataaaggtatagcaacaattaaaactactgaaaaacctgtgaaaatgcc 1001
Query: 1304 tgccgtcacagaaaggactaatagtactaaaaggaatgcatcaaaaatcttaaattttaa 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tgccgtcacagaaaggactaatagtactaaaaggaatgcatcaaaaatcttaaattttaa 1061
Query: 1364 tagaataacaacacaagagacaactgaagatgaaacttttcatattttaacagaacctga 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 tagaataacaacacaagagacaactgaagatgaaacttttcatattttaacagaacctga 1121
Query: 1424 gcatatcactgccgtgatgagtgatagggaaagagatcatacttcgctagatctaatatc 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gcatatcactgccgtgatgagtgatagggaaagagatcatacttcgctagatctaatatc 1181
Query: 1484 tgtgataagtatcgcaggaggagtgatgatggctgtaataacagtagcagtcgtcatcgt 1543
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 1182 tgtgataagtatcgcaggaggagttatgatggctgttataacagtagcagtcgtcatcgt 1241
Query: 1544 catgatagagaggtgtaagagacacagatacgatgacgtgaggaaaatcaatgacatacg 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 catgatagagaggtgtaagagacacagatacgatgacgtgaggaaaatcaatgacatacg 1301
Query: 1604 aatgcaagtcatcatggacaataacgatgagcctcctccctatgttagaagtatattcca 1663
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1302 aatgcaagtcatcatggacaataacgaggagcctcctccctatgttagaagtatattcca 1361
Query: 1664 tacaccattaccag 1677
||||||||||||||
Sbjct: 1362 tacaccattaccag 1375
Score = 244 bits (123), Expect = 6e-64
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 945 ccaaccctttcatatgaaaatgttacaccttcaacgacattgtgggttgataataaagaa 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaccctttcatatgaaaatgttacaccttcaacgacattgtgggttgataataaagaa 60
Query: 1005 aaatttcttaaaacaacagttacaaattttatctacaatagaacggaaacttcagaggca 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatttcttaaaacaacagttacaaattttatctacaatagaacggaaacttcagaggca 120
Query: 1065 gaa 1067
|||
Sbjct: 121 gaa 123
>BF01016B2E01
Length = 609
Score = 682 bits (344), Expect = 0.0
Identities = 359/364 (98%)
Strand = Plus / Plus
Query: 1414 cagaacctgagcatatcactgccgtgatgagtgatagggaaagagatcatacttcgctag 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cagaacctgagcatatcactgccgtgatgagtgatagggaaagagatcatacttcgctag 303
Query: 1474 atctaatatctgtgataagtatcgcaggaggagtgatgatggctgtaataacagtagcag 1533
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 304 atctaatatctgtgataagtatcgcaggaggagttatgatggctgttataacagtagcag 363
Query: 1534 tcgtcatcgtcatgatagagaggtgtaagagacacagatacgatgacgtgaggaaaatca 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcgtcatcgtcatgatagagaggtgtaagagacacagatacgatgacgtgaggaaaatca 423
Query: 1594 atgacatacgaatgcaagtcatcatggacaataacgatgagcctcctccctatgttagaa 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atgacatacgaatgcaagtcatcatggacaataacgatgagcctcctccctatgttagaa 483
Query: 1654 gtatattccatacaccattaccagaacctccaactacggatagaaatcattatcaaccaa 1713
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 484 gtatattccatacaccattaccagaacctcctactacggatagaaatcattatcaaccaa 543
Query: 1714 tatcgaccttagatagaaatttaaaacaattcatgcggcctgtcgttgtacaagccatct 1773
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 544 tatcgaccttagatagaaatttaaaacaattcatgcggcctgtcgttgttcaagccattt 603
Query: 1774 cacc 1777
||||
Sbjct: 604 cacc 607
Score = 387 bits (195), Expect = e-107
Identities = 198/199 (99%)
Strand = Plus / Plus
Query: 869 aacatcgtcaaccgaaaagactgaaaatactcctaagacgtccacatcacaaaccacaat 928
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 aacaacgtcaaccgaaaagactgaaaatactcctaagacgtccacatcacaaaccacaat 109
Query: 929 tacttcagttgttaatccaaccctttcatatgaaaatgttacaccttcaacgacattgtg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tacttcagttgttaatccaaccctttcatatgaaaatgttacaccttcaacgacattgtg 169
Query: 989 ggttgataataaagaaaaatttcttaaaacaacagttacaaattttatctacaatagaac 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ggttgataataaagaaaaatttcttaaaacaacagttacaaattttatctacaatagaac 229
Query: 1049 ggaaacttcagaggcagaa 1067
|||||||||||||||||||
Sbjct: 230 ggaaacttcagaggcagaa 248
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,568
Number of extensions: 5996
Number of successful extensions: 5996
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5996
Number of HSP's successfully gapped: 4
Length of query: 2593
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2576
Effective length of database: 8,119,229
Effective search space: 20915133904
Effective search space used: 20915133904
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)