BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14908 (UTR included)
(2329 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1H04 1072 0.0
BF14_2230_C1 1003 0.0
BF01044A1H02 100 2e-20
>BF01022A1H04
Length = 558
Score = 1072 bits (541), Expect = 0.0
Identities = 557/560 (99%), Gaps = 3/560 (0%)
Strand = Plus / Plus
Query: 1575 agtgcgaagaagtgggagagagaaagagaacagaaagagagacggcaaatgagcatgcgc 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgcgaagaagtgggagagagaaagagaacagaaagagagacggcaaatgagcatgcgc 60
Query: 1635 ctggcacagcttcacgacaagatgacggccgggcgagatctcccaaaacacgccccgact 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggcacagcttcacgacaagatgacggccgggcgagatctcccaaaacacgccccgact 120
Query: 1695 ccgtcgccacgttcacccaacaactccactgatgggctgcttccagctgtatgtgaaatt 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgtcgccacgttcacccaacaactccactgatgggctgcttccagctgtatgtgaaatt 180
Query: 1755 agagaattaggagcaagttcagagcaacaactgcagggcgtggacgggccttgctcgagt 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagaattaggagcaagttcagagcaacaactgcagggcgtggacgggccttgctcgagt 240
Query: 1815 tcctcgctttactgacagcaaaggtcaacgaccatcaggtcgattgactccctctcgtcg 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcctcgctttactgacagcaaaggtcaacgaccatcaggtcgattgactccctctcgtcg 300
Query: 1875 gacggcacgcccgccgtcgcctggatgtaggtacatacgaacattcatttagaagcatta 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacggcacgcccgccgtcgcctggatgtaggtacatacgaacattcatttagaagcatta 360
Query: 1935 cgagaaagaagacttacaagaggtgcgtgtgtgaggctaagtggttccaccagatacagt 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgagaaagaagacttacaagaggtgcgtgtgtgaggctaagtggttccaccagatacagt 420
Query: 1995 actattgatcgaagtatttgaagaaaaccccgtcatatcgaattattctaggcatcgcgt 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actattgatcgaagtatttgaagaaaaccccgtcatatcgaattattctaggcatcgcgt 480
Query: 2055 ttaaatatgttgtgatttcttgtcgatag-aataagagtccagaatgtccgttacaataa 2113
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 ttaaatatgttgtgatttcttgtcgatagaaataagagtccagaatgtccgttacaat-- 538
Query: 2114 aaaaaaaaactaatagacaa 2133
||||||||||||||||||||
Sbjct: 539 aaaaaaaaactaatagacaa 558
>BF14_2230_C1
Length = 767
Score = 1003 bits (506), Expect = 0.0
Identities = 506/506 (100%)
Strand = Plus / Plus
Query: 664 cccgctgtcggccgtggcgcggtgatgtcggaatggaggtggtcgcgctggtggtgtgcg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cccgctgtcggccgtggcgcggtgatgtcggaatggaggtggtcgcgctggtggtgtgcg 321
Query: 724 cgttggttgtgagcgcagcgccgaacgccacccgccgccgagaagcgcccgaccacgatg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cgttggttgtgagcgcagcgccgaacgccacccgccgccgagaagcgcccgaccacgatg 381
Query: 784 aagacgagctcgactactacgatgaagccaagatcaatatatcagaaaagggtatgtatc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aagacgagctcgactactacgatgaagccaagatcaatatatcagaaaagggtatgtatc 441
Query: 844 tcggatctccgtgcgagttcacttgcaacccccgtctgcttcacgtgtactgcgagccaa 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcggatctccgtgcgagttcacttgcaacccccgtctgcttcacgtgtactgcgagccaa 501
Query: 904 gaaccagctcgtgccagtgtgatcttaaataccccgtgtcgctcggggtcgccagaggct 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaaccagctcgtgccagtgtgatcttaaataccccgtgtcgctcggggtcgccagaggct 561
Query: 964 gcgctaagccaaagaaactgggcgagcaatgtttctaccaggagacttgtcgggcgttcg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcgctaagccaaagaaactgggcgagcaatgtttctaccaggagacttgtcgggcgttcg 621
Query: 1024 accctcacgcatcctgtgcgcagatcaatcacaacgcgtactgccagtgcgatgccggtt 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 accctcacgcatcctgtgcgcagatcaatcacaacgcgtactgccagtgcgatgccggtt 681
Query: 1084 accacaccaccacacactccaggcccacccaaagaatcttctgcactgaagacttggtac 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 accacaccaccacacactccaggcccacccaaagaatcttctgcactgaagacttggtac 741
Query: 1144 tgctgacggcggatatgccgacgctg 1169
||||||||||||||||||||||||||
Sbjct: 742 tgctgacggcggatatgccgacgctg 767
>BF01044A1H02
Length = 786
Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 1514 aggttcgagacgtccaagtttaagttcagtgcagagcagctcatcctcga 1563
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aggttcgagacgtccaagtttaagttcagtgcagagcagctcatcctcga 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,409
Number of extensions: 4793
Number of successful extensions: 4793
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4791
Number of HSP's successfully gapped: 3
Length of query: 2329
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2312
Effective length of database: 8,119,229
Effective search space: 18771657448
Effective search space used: 18771657448
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)