BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14915 (UTR included)
(2782 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01036X1C05 797 0.0
BF01013B1A10 726 0.0
BF01056A2F05 392 e-108
>BF01036X1C05
Length = 783
Score = 797 bits (402), Expect = 0.0
Identities = 414/418 (99%)
Strand = Plus / Minus
Query: 629 aggagacgacgaggacgccttccacgggaagttaccgccggggatcctgccgcacggact 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aggagacgacgaggacgccttccacgggaagttaccgccggggatcctgccgcacggact 359
Query: 689 gcccaccgtcaaggaggtgcagccggccgtcaccgccgcgcccgccgaaaagaaggacga 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gcccaccgtcaaggaggtgcagccggccgtcaccgccgcgcccgccgaaaagaaggacga 299
Query: 749 agaaaaggagaagaaagttcgcgagctgagcaacgacgagaagcagaccatcatgctgtc 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 298 agaaaaggagaagaaagttcgcgagctgagcaacgacgagaagcagaccatcatgttgtc 239
Query: 809 ggcggagttccagaagttcataagcagagcggggcgggtcatagaacgagcgctggccga 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggcggagttccagaagttcataagcagagcggggcgggtcatagaacgagcgctggccga 179
Query: 869 ggaggtcgacatctacacggactacaccggcggcggcgacggagaaaacgcgcaagacga 928
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 178 ggaggtcgacatctacacggactacaccggcggcggcgacggagagaacgcgcaagacga 119
Query: 929 caagtcggacgcgcgcttgtcgctggtgcgcacgttccaggacgagcgctggtcccgcgg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 caagtcggacgcgcgcttgtcgctggtgcgcacgttccaggacgagcgctggtcccgcgg 59
Query: 989 gcgctgcgtcacgtgcctggactggtcgacggcgcaccccgagctcatgctggcgtcc 1046
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 58 gcgctgcgtcacgtgcctggactggtcgacggcgcatcccgagctcatgatggcgtcc 1
Score = 97.6 bits (49), Expect = 9e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 549 gacgagtacaatctaaacccgggtttagagtgggaggacgagttcacag 597
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gacgagtacaatctaaacccgggtttagagtgggaggacgagttcacag 417
>BF01013B1A10
Length = 755
Score = 726 bits (366), Expect = 0.0
Identities = 381/386 (98%)
Strand = Plus / Minus
Query: 2112 agatgtaatctgaagtctgataagaaagatgaggaatgtaatgctgagtcgagtttgccc 2171
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 416 agatgtaatctgaagtctgatgagtaagatgaggaatgtaatgctgagtcgagtttgccc 357
Query: 2172 gctgtgaatcgaattaacataaaccgtataaggtcggcagattatccatacaaattattc 2231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gctgtgaatcgaattaacataaaccgtataaggtcggcagattatccatacaaattattc 297
Query: 2232 agtacagcgtgttataatattgctgtttcctatccaagtagatgtagataaatgttattc 2291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtacagcgtgttataatattgctgtttcctatccaagtagatgtagataaatgttattc 237
Query: 2292 agcaacatatttacggcacaaaaacttcattttcacttcttaatattgtactaactcaaa 2351
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 236 agcaacatatttacggcacaaaatcttcattttcacttcttaatattgtactaactcaaa 177
Query: 2352 gcagcttatcgtaagtaaaattatactgtaggcgaccagatgtaactattcttactgttt 2411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gcagcttatcgtaagtaaaattatactgtaggcgaccagatgtaactattcttactgttt 117
Query: 2412 attatatactaagtaacttagtgttatagatgttatatttatttataaaaatgttatgct 2471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 116 attatatactaagtaacttagtgttatagatgttatatttatttataaaaatgttaagct 57
Query: 2472 ggcacttagtctgcatggtaacactc 2497
||| ||||||||||||||||||||||
Sbjct: 56 ggcccttagtctgcatggtaacactc 31
Score = 464 bits (234), Expect = e-130
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1874 ccgcgtgtcgtggagtccgagcggcgcacacgtcacggccggggacgacgcgggcaagat 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ccgcgtgtcgtggagtccgagcggcgcacacgtcacggccggggacgacgcgggcaagat 696
Query: 1934 atgggtctacgagctggccgagaacgtagcccagccgcggcatgatgagtggagcaagtt 1993
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 695 atgggtctacgagctggccgagaacgtagcccagccgcgacatgatgagtggagcaagtt 636
Query: 1994 cgtgtacacgttgcaagaactgaggaacaaccaggcggacgaggaaacggatcgcctcag 2053
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cgtgtacacgctgcaagaactgaggaacaaccaggcggacgaggaaacggatcgcctcag 576
Query: 2054 cctggccagcggaccaccgtcgctctccagcctcacctcgctggccagcaacccgctcag 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cctggccagcggaccaccgtcgctctccagcctcacctcgctggccagcaacccgctcag 516
Query: 2114 at 2115
||
Sbjct: 515 at 514
>BF01056A2F05
Length = 566
Score = 392 bits (198), Expect = e-108
Identities = 244/262 (93%)
Strand = Plus / Minus
Query: 1797 ctcgacctctggaacctcaacagggacaccgaggtgccgatagcgtcggtgatgtcggag 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctcgacctctggaacctcaacagggacaccgaggtgccgatagcgtcggtgatgtcggag 507
Query: 1857 ggcggcgtggccttcaaccgcgtgtcgtggagtccgagcggcgcacacgtcacggccggg 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggcggcgtggccttcaaccgcgtgtcgtggagtccgagcggcgcacacgtcacggccggg 447
Query: 1917 gacgacgcgggcaagatatgggtctacgagctggccgagaacgtagcccagccgcggcat 1976
| |||||||||||||||||||||| || || |||||||| | |||||||||||||
Sbjct: 446 gnngacgcgggcaagatatgggtctccgcnctcgccgagaannnannccagccgcggcat 387
Query: 1977 gatgagtggagcaagttcgtgtacacgttgcaagaactgaggaacaaccaggcggacgag 2036
|||||||||||| ||||||||| |||| ||||| ||||||| | ||||||||||||||||
Sbjct: 386 gatgagtggagccagttcgtgtccacgctgcaacaactgagcaccaaccaggcggacgag 327
Query: 2037 gaaacggatcgcctcagcctgg 2058
||| ||||||||||||||||||
Sbjct: 326 gaaccggatcgcctcagcctgg 305
Score = 242 bits (122), Expect = 3e-63
Identities = 125/126 (99%)
Strand = Plus / Minus
Query: 1990 agttcgtgtacacgttgcaagaactgaggaacaaccaggcggacgaggaaacggatcgcc 2049
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agttcgtgtacacgctgcaagaactgaggaacaaccaggcggacgaggaaacggatcgcc 236
Query: 2050 tcagcctggccagcggaccaccgtcgctctccagcctcacctcgctggccagcaacccgc 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tcagcctggccagcggaccaccgtcgctctccagcctcacctcgctggccagcaacccgc 176
Query: 2110 tcagat 2115
||||||
Sbjct: 175 tcagat 170
Score = 105 bits (53), Expect = 4e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 2112 agatgtaatctgaagtctgataagaaagatgaggaatgtaatgctgagtcgagtttgccc 2171
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 72 agatgtaatctgaagtctgatgagtaagatgaggaatgtaatgctgagtcgagtttgccc 13
Query: 2172 g 2172
|
Sbjct: 12 g 12
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,884
Number of extensions: 7212
Number of successful extensions: 7212
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7212
Number of HSP's successfully gapped: 7
Length of query: 2782
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2765
Effective length of database: 8,119,229
Effective search space: 22449668185
Effective search space used: 22449668185
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)