BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14963 (UTR included)
(1660 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 153 1e-36
BF01031B2E06 121 4e-27
BF14_335_C2 119 1e-26
BF01060B1D11 96 2e-19
BF01037A2H12 76 2e-13
BF01019A1H08 74 8e-13
BF01048A1E04 70 1e-11
>BF01047B2H03
Length = 758
Score = 153 bits (77), Expect = 1e-36
Identities = 296/365 (81%), Gaps = 3/365 (0%)
Strand = Plus / Minus
Query: 582 acttgctacatctgcggggaggcagttggaagtgctaagcatttgctggtgggatgtagg 641
|||||||| ||||||| |||||||||||||| |||| ||||||||||| |||||||||||
Sbjct: 364 acttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtagg 305
Query: 642 gtactcctagatagcgggcagtact-cgcgtcgtcacgataggattttagaaatcatacg 700
||||||| |||||||| || |||| | ||| || |||||| ||||| | ||||||
Sbjct: 304 ctactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcataca 245
Query: 701 tgaagcggttagtctatggcaagcaagatcgcaaaaagaaataactacaagccaacgatc 760
||||||||||||| | | | || | || ||||||||||||| |||| | ||||
Sbjct: 244 tgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgatt 185
Query: 761 aataggttttgtgagagaaggcactagggctacaaaatcaaacgacaagccttactctat 820
||| |||||||||||||||| || |||||||| ||| |||||| |||||||||||||||
Sbjct: 184 aattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctat 125
Query: 821 tattaaagcggctttggattggactttaatgatggacacgtatgagaagcaatataagat 880
||||||||| || |||||| ||| |||| ||||| ||||||| | | | ||| || ||
Sbjct: 124 ccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgatacaaaat 65
Query: 881 caaagaggatatttgtgcgtcggcctccagaccggacttatttt-tatattcgcgaattt 939
| ||| ||| ||||| ||||| |||||||| ||| |||||| |||||||||||||||
Sbjct: 64 ccccgagcata-ttgtgtgtcggtttccagaccagacatattttatatattcgcgaattt 6
Query: 940 taaag 944
|||||
Sbjct: 5 taaag 1
>BF01031B2E06
Length = 707
Score = 121 bits (61), Expect = 4e-27
Identities = 95/105 (90%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 978 gaaacaaacatccccaaagaccatgccatcaaggtcaacaggtattacgaa-ctcactaa 1036
||||| ||||||||||||||||||||||||||| |||| | |||||||||| ||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 1037 gaatatgttcgttgtgaatttgtacgcggtagaagtaggagcgag 1081
||||| |||||| | |||||||||||||||||||| ||||||||
Sbjct: 496 gaataggttcgtggcaaatttgtacgcggtagaagtgggagcgag 540
>BF14_335_C2
Length = 1827
Score = 119 bits (60), Expect = 1e-26
Identities = 130/152 (85%), Gaps = 1/152 (0%)
Strand = Plus / Minus
Query: 927 tattcgcgaattttaaagcgcgttgtactaatagagctcacggttctttgggaaacaaac 986
|||||||||||||||||||||| | |||||||||| ||||||| |||| | || |||
Sbjct: 1266 tattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttggaagaccaac 1207
Query: 987 atccccaaagaccatgccatcaaggtcaacaggtattacgaactcactaagaatatgttc 1046
||||||||| ||||||||||||||||||||| |||||| || ||||||| ||||| ||||
Sbjct: 1206 atccccaaaaaccatgccatcaaggtcaacaagtattatgagctcactaggaataggttc 1147
Query: 1047 gttgt-gaatttgtacgcggtagaagtaggag 1077
|| | |||||||||| ||||||||| ||||
Sbjct: 1146 gtaataaaatttgtacgtggtagaagtgggag 1115
>BF01060B1D11
Length = 799
Score = 95.6 bits (48), Expect = 2e-19
Identities = 97/113 (85%), Gaps = 4/113 (3%)
Strand = Plus / Minus
Query: 538 cagatcagagttatttagtaaga----tggggcaaaggtaccgaaaatacttgctacatc 593
||||||||||| ||||||||||| |||| |||| ||||||||| |||||||| ||
Sbjct: 231 cagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctatatt 172
Query: 594 tgcggggaggcagttggaagtgctaagcatttgctggtgggatgtagggtact 646
|||| | |||||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 171 tgcgagaaggcagttggaattgctaagcatttgctgatgggatgtaggctact 119
>BF01037A2H12
Length = 773
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1048 ttgtgaatttgtacgcggtagaagtaggagcgagaggtataacagccaaa 1097
||||||||||||||| |||| ||||||||||||||||||||| |||||||
Sbjct: 666 ttgtgaatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaa 715
>BF01019A1H08
Length = 504
Score = 73.8 bits (37), Expect = 8e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1096 aacgcgatggacccggcacccgcgcggtgactccgtggaatgctgagaggtttcgtctca 1155
||||||||||||||||||||||| |||||| ||| | ||||||| ||||||||| |||||
Sbjct: 422 aacgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctca 363
Query: 1156 t 1156
|
Sbjct: 362 t 362
>BF01048A1E04
Length = 789
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 1096 aacgcgatggacccggcacccgcgcggtgactccgtggaatgctgagaggtttcgtctc 1154
||||||||||||||||||||||| |||||| ||| ||||| | | ||||||||||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaaagataagaggtttcgtctc 59
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,381
Number of extensions: 5283
Number of successful extensions: 5283
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 5282
Number of HSP's successfully gapped: 8
Length of query: 1660
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1643
Effective length of database: 8,119,229
Effective search space: 13339893247
Effective search space used: 13339893247
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)