BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14969 (UTR included)
(2287 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2793_C1 523 e-148
>BF14_2793_C1
Length = 891
Score = 523 bits (264), Expect = e-148
Identities = 264/264 (100%)
Strand = Plus / Plus
Query: 1531 atggggtgagtgtccacaacggtaggcaaaccagtgagctgattatcgggaaagcggaac 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 atggggtgagtgtccacaacggtaggcaaaccagtgagctgattatcgggaaagcggaac 687
Query: 1591 ctcggcatgcaggcaactacacgtgtgttccggctaatgcccgagccgcctccgttacag 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctcggcatgcaggcaactacacgtgtgttccggctaatgcccgagccgcctccgttacag 747
Query: 1651 tacacgtcgtacaaagcgaaacgccagccgcaatgcagcacggaaataattcttcagtta 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tacacgtcgtacaaagcgaaacgccagccgcaatgcagcacggaaataattcttcagtta 807
Query: 1711 aaatacaactttcacaattattatttgctatgacattattatatataattcaacacattt 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 aaatacaactttcacaattattatttgctatgacattattatatataattcaacacattt 867
Query: 1771 tgcgaggatatggataacattata 1794
||||||||||||||||||||||||
Sbjct: 868 tgcgaggatatggataacattata 891
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 356,986
Number of extensions: 7805
Number of successful extensions: 7805
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7805
Number of HSP's successfully gapped: 1
Length of query: 2287
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2270
Effective length of database: 8,119,229
Effective search space: 18430649830
Effective search space used: 18430649830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)