BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14977 (UTR included)
(2551 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3116_C1 1612 0.0
>BF14_3116_C1
Length = 1687
Score = 1612 bits (813), Expect = 0.0
Identities = 844/853 (98%), Gaps = 1/853 (0%)
Strand = Plus / Plus
Query: 1700 gctgtacgtggtgataccaccaagaagatcaacggc-ggaggctttccagattttgatct 1758
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 633 gctgtacgtggtgataccaccaagaagatcaacggctggaggctttccagattttgatct 692
Query: 1759 cacatatgtttggggatgctggcagtccctatttggttggagttatatccgagaacttga 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cacatatgtttggggatgctggcagtccctatttggttggagttatatccgagaacttga 752
Query: 1819 agagatcgctttcacctttcgaagaacctagcaacagtgtcaaatttcgatcgcttcagt 1878
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 agagatcactttcacctttcgaagaacctagcaacagtgtcaaatttcgatcgcttcagt 812
Query: 1879 acgccttgttcattacatgtttcgtagaggttattggaggaattttcttcctactgacgg 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 acgccttgttcattacatgtttcgtagaggttattggaggaattttcttcctactgacgg 872
Query: 1939 ccatttacattgtgagagataaacttagagttgaacgagaaatcgcagaagccgaggcac 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 ccatttacattgtgagagataaacttagagttgaacgagaaatcgcagaagccgaggcac 932
Query: 1999 aaagtgctgaaccatctcacagcaacgcacaagaaaatcccggcgttgaataatattaac 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 aaagtgctgaaccatctcacagcaacgcacaagaaaatcccggcgttgaataatattaac 992
Query: 2059 attattactttccagtcacaataagtctttggttatggtgaaacgagaattacaatcaca 2118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 attattactttccagtcacaataagtctttggttatggtgaaacgagaattacaatcaca 1052
Query: 2119 ttgtaccaattgttctttcaaacatttatattcataatacaattgtgaccatttgattga 2178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ttgtaccaattgttctttcaaacatttatattcataatacaattgtgaccatttgattga 1112
Query: 2179 taatttgaaggtaaagactgaatgtagggcaaagcttgtgggtatgcgagtgagatagta 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 taatttgaaggtaaagactgaatgtagggcaaagcttgtgggtatgcgagtgagatagta 1172
Query: 2239 taattaatttaggtcacggcatcacagcacctactggttagggatttagatacgatgtgc 2298
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1173 taattaatttaggtcacggcatcacagcacctactggttagggatttagatacaatgtgc 1232
Query: 2299 ctaacagattcccctgatagaaatgcattttaataattacttttttcatagcatccatct 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 ctaacagattcccctgatagaaatgcattttaataattacttttttcatagcatccatct 1292
Query: 2359 aaatttgtattcacaaaacatccgttatttaaaatcttaaagcaattgaaacttttctac 2418
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1293 caacttgtattcacaaaacatccgttatttaaaatcttaaagcaatggaaacttttctaa 1352
Query: 2419 cggttaatgcttttaatttattgcctttactatagcaaataaagtacaatcatatacttg 2478
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 cggctaatgcttttaatttattgcctttactatagcaaataaagtacaatcatatacttg 1412
Query: 2479 catctctttgtgaatacaaacatggaatttaaggctttgagcggaacttatttagttgag 2538
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 caactctttgtgaatacaaacatggaatttaaggctttgagcggaacttatttagttgag 1472
Query: 2539 cagatgtcatctc 2551
|||||||||||||
Sbjct: 1473 cagatgtcatctc 1485
Score = 1174 bits (592), Expect = 0.0
Identities = 607/612 (99%)
Strand = Plus / Plus
Query: 831 aaaatgcttgcgcttttctatttcgcgataccagtcgggagcggttttggctatatagtc 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaatgcttgcgcttttctatttcgcgataccagtcgggagcggttttggctatatagtc 60
Query: 891 ggttcagcggctggtgccgctatgggtaattggcgttacgggttgcgtgtgaccccgttc 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttcagcggctggtgccgctatgggtaattggcgttacgggttgcgtgtgaccccgttc 120
Query: 951 ctcggagccctggccgtggtgctgatgctgtgggtcatggaaaaccctgagcgtggtcag 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcggagccctggccgtggtgctgatgctgtgggtcatggaaaaccctgagcgtggtcag 180
Query: 1011 gcggaggagagccggatgaaaccgacttcgtaccaggaggatctcaagtcgctgatcagg 1070
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 gcggaggagagccgaatgaaaccgacttcgtaccaggaggatctcaagtcgctcatcagg 240
Query: 1071 aatccgtcattcatgttgtcgactttggctttcacgtgcgtcgcgtttgtgacgggggcg 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatccgtcattcatgttgtcgactttggctttcacgtgcgtcgcgtttgtgacgggggcg 300
Query: 1131 ctcgcctggtggggcccggacttcatcaggctagggctgaccctgcagactggacaggaa 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcgcctggtggggcccggacttcatcaggctagggctgaccctgcagactggacaggaa 360
Query: 1191 gtctccatagaaggcgtatcattcaagttcgggctggtgggtatggcggcgggggcgctg 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtctccatagaaggcgtatcattcaagttcgggctggtgggtatggcggcgggggcgctg 420
Query: 1251 ggcgtccctctggggtctctgctcgcccagcatatgcggacccgcacccccgccggcgac 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcgtccctctggggtctctgctcgcccagcatatgcggacccgcacccccgccggcgac 480
Query: 1311 cctctgctctgcggcttcgcgctgctggtctcctcgccgctggtgtacctcgcgctgttc 1370
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctctgctctgcggctccgcgcttctggtctcctcgccgctggtgtacctcgcgctgttc 540
Query: 1371 tccaccgcccacttggcgggcctcagttacctgctcgtgttcctcggcatgctaacgctc 1430
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccaccgcccacgtggcgggcctcagttacctgctcgtgttcctcggcatgctaacgctc 600
Query: 1431 aacctcacctgg 1442
||||||||||||
Sbjct: 601 aacctcacctgg 612
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,935
Number of extensions: 5546
Number of successful extensions: 5546
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5545
Number of HSP's successfully gapped: 2
Length of query: 2551
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2534
Effective length of database: 8,119,229
Effective search space: 20574126286
Effective search space used: 20574126286
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)