BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14978 (UTR included)
(1654 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1G06 1491 0.0
BF14_1192_C1 103 9e-22
>BF01049A1G06
Length = 796
Score = 1491 bits (752), Expect = 0.0
Identities = 785/796 (98%)
Strand = Plus / Plus
Query: 461 cattaataattttaatctattagttgtttaaagattaatcatgagcagccgtaatcctta 520
||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||
Sbjct: 1 cattaataattttaatctattagttatttaacgattaatcatgagcagccgtaaccctta 60
Query: 521 cactttaatgagtgtcccggatgaacagttcgattatttatttaaaattgttctcattgg 580
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 cactttaatgagtgtcccggatgaacagttcgattatttatttaaaattgttcttattgg 120
Query: 581 ggattgcggaacaggaaagacatgcattgtgcaacgcttgaaatccggaaatttcatcga 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggattgcggaacaggaaagacatgcattgtgcaacgcttgaaatccggaaatttcatcga 180
Query: 641 aagacacggcaatacaataggtgtagacttttcaatgaaaactttgattgtagacgggaa 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagacacggcaatacaataggtgtagacttttcaatgaaaactttgattgtagacgggaa 240
Query: 701 gagggtcaagctccagatatgggatacagcggggcaggaacgctttagaacgatcacgca 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagggtcaagctccagatatgggatacagcggggcaggaacgctttagaacgatcacgca 300
Query: 761 aagctactatcgctctgccaatggtgtaattatagtttacgatataacaaaacgatcaac 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagctactatcgctctgccaatggtgtaattatagtttacgatataacaaaacgatcaac 360
Query: 821 ctttctgtccatacaaaaatggatagaagaagtacggaggtatacatcatctaatgttat 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctttctgtccatacaaaaatggatagaagaagtacggaggtatacatcatctaatgttat 420
Query: 881 cgtatcattgattggtaataaatgtgatctaacagagcaaagagaggtggaacccgatga 940
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 421 cgtatcattgattggtaataaatgtgatctaacagaacaaagagaggtggaaccggatga 480
Query: 941 gcccaagtctttctgtcgttatgtccctgaaataatgtttgtcatggaaacatcagctaa 1000
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 481 gcccaagtctttctgccgttatgtccctgaaataatgtttgttatggaaacatcagctaa 540
Query: 1001 agataacacaaatgttgaggacacattcagaaatatagcaacagagctgaagagacaaca 1060
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 541 agataacacaaatgttgaggacacattcagaaatatagcgacagagctgaagaggcaaca 600
Query: 1061 tgataatagtgaaggacctccggcggagtcagaatcagtggtgctcggtgagagtcatcc 1120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 601 tgataatagtgaaggacctccggcggagtcagaatcagtggtactcggtgagagtcatcc 660
Query: 1121 tgtaagtagatgtcaaccatgtaaatcttcttaggacgacatagcaccatagacaatttt 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgtaagtagatgtcaaccatgtaaatcttcttaggacgacatagcaccatagacaatttt 720
Query: 1181 cgccattttctttaaaacagtcttaatgatcaaatgttttaattattctgccatggctat 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgccattttctttaaaacagtcttaatgatcaaatgttttaattattctgccatggctat 780
Query: 1241 gcttttgtaaataata 1256
||||||||||||||||
Sbjct: 781 gcttttgtaaataata 796
>BF14_1192_C1
Length = 1037
Score = 103 bits (52), Expect = 9e-22
Identities = 64/67 (95%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 1 aacaaagagcaaaatttgacagtgtacgatcatcgtacatttcttttttgtttt--agaa 58
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 67 aacaaagagcaaaatttgacagtgtaggatcatcgtacatttcttttttgttttacagaa 8
Query: 59 aagaaat 65
|||||||
Sbjct: 7 aagaaat 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,269
Number of extensions: 6263
Number of successful extensions: 6263
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6263
Number of HSP's successfully gapped: 2
Length of query: 1654
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1637
Effective length of database: 8,119,229
Effective search space: 13291177873
Effective search space used: 13291177873
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)