BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14994 (UTR included)
(2005 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2F06 1195 0.0
BF01045A2B01 702 0.0
>BF01039B2F06
Length = 782
Score = 1195 bits (603), Expect = 0.0
Identities = 618/623 (99%)
Strand = Plus / Plus
Query: 519 atgaccgtcggccaaacgaatgttccgaaatacaaactcaacaacggaagagagatgccc 578
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 160 atgaccgtcggccaaacgaatgttccgaaatacaaactcattaacggaagagagatgccc 219
Query: 579 gccattgctctggggacttacttagggcacgacaagagcggtatggtgaggtcggtcaac 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gccattgctctggggacttacttagggcacgacaagagcggtatggtgaggtcggtcaac 279
Query: 639 aaacagctgagggacgtggtgatgcaagccatagacgtcggatacagacacttcgacaca 698
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 280 aaacagctgagggacgtggtgatgcaagccatagacgtcgggtacagacacttcgacacc 339
Query: 699 gcggagatatacggcactgaggaggagctgggggagggagtccggaggaagatggaggag 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcggagatatacggcactgaggaggagctgggggagggagtccggaggaagatggaggag 399
Query: 759 ggagccgtccgcagggaggaactgttcattaccgacaagctatggaacactcaccacaag 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggagccgtccgcagggaggaactgttcattaccgacaagctatggaacactcaccacaag 459
Query: 819 cgggagcaggtggtgccgtctctgagggagtctctctgtaagatgggactgagttacata 878
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 460 cgggagcaggtggtgccgtctctgagggagtctctcagtaagatgggactgagttacata 519
Query: 879 gacctgttcctcatgcactggcccatgggacttcatgaggactacacgcactcggacgtg 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gacctgttcctcatgcactggcccatgggacttcatgaggactacacgcactcggacgtg 579
Query: 939 gacttcatggagacgtggctgggcctggaggacgcggtgcggctcggcctcgcgaggaac 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gacttcatggagacgtggctgggcctggaggacgcggtgcggctcggcctcgcgaggaac 639
Query: 999 atcggcgtgtccaacttcaacaagcaacagctggagaggatcctccgcgagggcagcatc 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 atcggcgtgtccaacttcaacaagcaacagctggagaggatcctccgcgagggcagcatc 699
Query: 1059 cgaccagcggcgctgcagatagaggtccatcctcaaataatacaaacggagctggtgcag 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cgaccagcggcgctgcagatagaggtccatcctcaaataatacaaacggagctggtgcag 759
Query: 1119 ctcgctcagcgtcaccagctcgt 1141
|||||||||||||||||||||||
Sbjct: 760 ctcgctcagcgtcaccagctcgt 782
>BF01045A2B01
Length = 720
Score = 702 bits (354), Expect = 0.0
Identities = 372/379 (98%)
Strand = Plus / Plus
Query: 519 atgaccgtcggccaaacgaatgttccgaaatacaaactcaacaacggaagagagatgccc 578
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 342 atgaccgtcggccaaacgaatgttccgaaatacaaactcattaacggaagagagatgccc 401
Query: 579 gccattgctctggggacttacttagggcacgacaagagcggtatggtgaggtcggtcaac 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gccattgctctggggacttacttagggcacgacaagagcggtatggtgaggtcggtcaac 461
Query: 639 aaacagctgagggacgtggtgatgcaagccatagacgtcggatacagacacttcgacaca 698
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 462 aaacagctgagggacgtggtgatgcaagccatagacgtcgggtacagacacttcgacacc 521
Query: 699 gcggagatatacggcactgaggaggagctgggggagggagtccggaggaagatggaggag 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gcggagatatacggcactgaggaggagctgggggagggagtccggaggaagatggaggag 581
Query: 759 ggagccgtccgcagggaggaactgttcattaccgacaagctatggaacactcaccacaag 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ggagccgtccgcagggaggaactgttcattaccgacaagctatggaacactcaccacaag 641
Query: 819 cgggagcaggtggtgccgtctctgagggagtctctctgtaagatgggactgagttacata 878
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 642 cgggagcaggtggtgccgtctctgnnngagtctctctgtaagatgggactgagttacata 701
Query: 879 gacctgttcctcatgcact 897
|||||||||||||||||||
Sbjct: 702 gacctgttcctcatgcact 720
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,778
Number of extensions: 6156
Number of successful extensions: 6156
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6156
Number of HSP's successfully gapped: 2
Length of query: 2005
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1988
Effective length of database: 8,119,229
Effective search space: 16141027252
Effective search space used: 16141027252
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)