BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14999 (UTR included)
(3826 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B2C12 1166 0.0
>BF01030B2C12
Length = 596
Score = 1166 bits (588), Expect = 0.0
Identities = 594/596 (99%)
Strand = Plus / Plus
Query: 1854 ataacagctaaggctctggacaagaaaaaagattgggtcggacggtttttgtgtgccctc 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataacagctaaggctctggacaagaaaaaagattgggtcggacggtttttgtgtgccctc 60
Query: 1914 ataaaaaataagagagtcaaagaggattttcccgacattctgagtattgttaaggcgctg 1973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaaaaataagagagtcaaagaggattttcccgacattctgagtattgttaaggcgctg 120
Query: 1974 caagggaaaggaattaaaatatcaacatcagcagccgactattgcttgtcccgtgtaccg 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagggaaaggaattaaaatatcaacatcagcagccgactattgcttgtcccgtgtaccg 180
Query: 2034 gaacatcccaagaaggaactcattgacagttttaaagaggctctggtgaatataacagac 2093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacatcccaagaaggaactcattgacagttttaaagaggctctggtgaatataacagac 240
Query: 2094 gagagattagtcgatgaaggagagatgtttgtgcaacagattcagcacccgaagcaaatg 2153
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 gagagattagtcgatgaaggagagatgttcgtgcaacagattcagcacccgaagcaaatg 300
Query: 2154 aacgaagaggccttgtctgctcacctggtggagcttgaatctaaggggatgaacacacgg 2213
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacgaagaggccttgtctgctcacctggtggagcttgaatctaaggggatgaacacacga 360
Query: 2214 ggcgtcctgcggaaactgttgcagcagtactgcaggtctggaaatctggctgccgcgagg 2273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcgtcctgcggaaactgttgcagcagtactgcaggtctggaaatctggctgccgcgagg 420
Query: 2274 gagattctggaaaagtgcgagagggagggggtgttcctatcagctggaatgaaagcatca 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagattctggaaaagtgcgagagggagggggtgttcctatcagctggaatgaaagcatca 480
Query: 2334 atattcgatcttcacgtgaaacagggggagttggatatggctgaattggtgttagcggat 2393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atattcgatcttcacgtgaaacagggggagttggatatggctgaattggtgttagcggat 540
Query: 2394 ttgaacaaatcatcaccaaattttactttggatgaatacaaagtcatagacttcgc 2449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgaacaaatcatcaccaaattttactttggatgaatacaaagtcatagacttcgc 596
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 415,587
Number of extensions: 7047
Number of successful extensions: 7047
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7047
Number of HSP's successfully gapped: 1
Length of query: 3826
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3808
Effective length of database: 8,109,745
Effective search space: 30881908960
Effective search space used: 30881908960
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)