BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15034 (UTR included)
(2302 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1808_C1 2353 0.0
>BF14_1808_C1
Length = 1203
Score = 2353 bits (1187), Expect = 0.0
Identities = 1199/1203 (99%)
Strand = Plus / Plus
Query: 489 ggatgttcgacgatggcagatgctaagcaaagtaaaacagaagaaatatacaatggatca 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgttcgacgatggcagatgctaagcaaagtaaaacagaagaaatatacaatggatca 60
Query: 549 tcccagtctcgtgttgttttggcgaaacctcgactaggaggctttggatcctctaactta 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcccagtctcgtgttgttttggcgaaacctcgactaggaggctttggatcctctaactta 120
Query: 609 cttaactctagttcaagtaaaagctgtaacccatttggatcagttttacgtccgccacag 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttaactctagttcaagtaaaagctgtaacccatttggatcagttttacgtccgccacag 180
Query: 669 ctgaagcctgggaataatccttttctaaaagttagcgaaactaaacctagtgtagataaa 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgaagcctgggaataatccttttctaaaagttagcgaaactaaacctagtgtagataaa 240
Query: 729 gacaagaattcaaatgaagaaacaggggaaaacaggcaacaggagtccaaagaagaggaa 788
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 gacaagaattcaaatgaagaaacaggagaaaacaggcaacaggagtccaaagaagaggaa 300
Query: 789 gctcccaaatttgtacctctcggttcaagtagttcagcatcaaggtcggcaacaacgatg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctcccaaatttgtacctctcggttcaagtagttcagcatcaaggtcggcaacaacgatg 360
Query: 849 ccagcaccatcacaggctacttcctcatcaggatttgtatttggacagaatttaagcgaa 908
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 ccagcaccatcacaggctacttcctcatcaggatttgtattcggacagaatttaagcgaa 420
Query: 909 agggtggtcattaaagaatcacttaacaatggagaagcttcagtggaccacagttcttcg 968
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagtggtcattaaagaatcacttaacaatggagaagcttcagtggaccacagttcttcg 480
Query: 969 aatgggacttcagagttacttttcacaagtgctgcagcgtctgttaaggaaaacaatcag 1028
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 481 aatgggacttcagagttacttttcacaagtgctgcagcatctgttaaggaaaacaatcag 540
Query: 1029 acgcaagaggaaggaggtttgtatgagagtggtgaaggtctcgctgctgccgcggctgaa 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acgcaagaggaaggaggtttgtatgagagtggtgaaggtctcgctgctgccgcggctgaa 600
Query: 1089 tatgagcgatcacacgctcgcccccctccacccgccaactactgcacaatgacgggggag 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatgagcgatcacacgctcgcccccctccacccgccaactactgcacaatgacgggggag 660
Query: 1149 gaagacgagataaatgtgatgcagatatcctgtcgtctcttcgcctgggagagtggtagt 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaagacgagataaatgtgatgcagatatcctgtcgtctcttcgcctgggagagtggtagt 720
Query: 1209 tggcgcgagcggggacgcggtgttcttcgcctgaacgatggcgccggcggttcgggggcg 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tggcgcgagcggggacgcggtgttcttcgcctgaacgatggcgccggcggttcgggggcg 780
Query: 1269 aggttggttgctcgtgttgctgggtctctgagggtcgtgctcaacactaaactgtggccg 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aggttggttgctcgtgttgctgggtctctgagggtcgtgctcaacactaaactgtggccg 840
Query: 1329 gacatggtcgtagaccgagccgccaataagtcgctgaggatcacggccgcggacgcccag 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gacatggtcgtagaccgagccgccaataagtcgctgaggatcacggccgcggacgcccag 900
Query: 1389 cagcaggtcaagctgttcctcatcatgggaacaccaggcgatatagcacaattacataaa 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cagcaggtcaagctgttcctcatcatgggaacaccaggcgatatagcacaattacataaa 960
Query: 1449 gcgttgctgtctcgtatatcactcagcaagcgtagttataactccaaggaagatgagaac 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcgttgctgtctcgtatatcactcagcaagcgtagttataactccaaggaagatgagaac 1020
Query: 1509 tcgcagagatcggccgagagattggaagctgccaccgacgataatgattacacagagaaa 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcgcagagatcggccgagagattggaagctgccaccgacgataatgattacacagagaaa 1080
Query: 1569 tctgtagacgattcaaatcaagaagacgagggatcgaactttgacgaagaacaagacatt 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tctgtagacgattcaaatcaagaagacgagggatcgaactttgacgaagaacaagacatt 1140
Query: 1629 gacattcaaagagaccaggagagtgaaaatagacttgaaagtagtaaagaaaagagtgac 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gacattcaaagagaccaggagagtgaaaatagacttgaaagtagtaaagaaaagagtgac 1200
Query: 1689 gag 1691
|||
Sbjct: 1201 gag 1203
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 282,374
Number of extensions: 6171
Number of successful extensions: 6171
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6171
Number of HSP's successfully gapped: 1
Length of query: 2302
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2285
Effective length of database: 8,119,229
Effective search space: 18552438265
Effective search space used: 18552438265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)