BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15040 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2078_C1 1836 0.0
>BF14_2078_C1
Length = 962
Score = 1836 bits (926), Expect = 0.0
Identities = 955/962 (99%), Gaps = 2/962 (0%)
Strand = Plus / Plus
Query: 301 tttacaattatgattaacgtatcaatgttttaattgtttaccatggtgctgattcagtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2 tttacaattatgattaacgtatcaatgttttaattgtttaccatggtgctgatccagtga 61
Query: 361 tttacatttacaaaatatatttggattttgttgacaaggaatgaaacttgtgtctcattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttacatttacaaaatatatttggattttgttgacaaggaatgaaacttgtgtctcattt 121
Query: 421 tgatttaatagtgtagtgaaatggtttaaaaacgtaacccataattatattcaaattgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgatttaatagtgtagtgaaatggtttaaaaacgtaacccataattatattcaaattgaa 181
Query: 481 ttgattttttgagtgcaaaa-atggcatcgatcgtattgaaaagcttatcagtacttttg 539
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 182 ttgattttttgagtgcaaaaaatggcatcgatcgtattgaaaagcttgtcagtacttttg 241
Query: 540 ggaatcttttttatttttgttggcataaccaagctaacacctttaatttcaaaagaatta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggaatcttttttatttttgttggcataaccaagctaacacctttaatttcaaaagaatta 301
Query: 600 cataaagatctgagaaaggagtatgtgaggtacgctaaggtcttcccgttcacagaaatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cataaagatctgagaaaggagtatgtgaggtacgctaaggtcttcccgttcacagaaatg 361
Query: 660 ttggatttcaaactaccctccaaatactaccgccgcaccgtcggtgggctcgagatattg 719
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 362 ttggatttcaaactaccctccaaatactaccgccgcaccgtcggcgggctcgagatactg 421
Query: 720 ttcggactagccttggctataataccgagccataaaatcaagaacacggcgaacgtgggc 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttcggactagccttggctataataccgagccataaaatcaagaacacggcgaacgtgggt 481
Query: 780 ctggtgttgttgatgatactggcggcgtactcccacgtgatggtgggcgacccattcgac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctggtgttgttgatgatactggcggcgtactcccacgtgatggtgggcgacccattcgac 541
Query: 840 cgatgcgccccggctcttgtcttcttcttcatgctcacaggaagactcgttgtttggtac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cgatgcgccccggctcttgtcttcttcttcatgctcacaggaagactcgttgtttggtac 601
Query: 900 caaaccagccgacgagaggaaatggaaaaggcggcgaccacacagaatgggaacggcctc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 caaaccagccgacgagaggaaatggaaaaggcggcgaccacacagaatgggaacggcctc 661
Query: 960 aagagagactaaattctaaaaccattataaggatgcggacacactctcctaaaaacatta 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aagagagactaaattctaaaaccattataaggatgcggacacactctcctaaaaacatta 721
Query: 1020 ttaaattagtataacctcattggaatcttcataagataatgcagaagaatggattgctta 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttaaattagtataacctcattggaatcttcataagataatgcagaagaatggattgctta 781
Query: 1080 attttttaataaatttactgtgatttttattgctagtcaaaacttttttttttaatagat 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 attttttaataaatttactgtgatttttattgctagtcaaaacttttttttttaatagat 841
Query: 1140 taatttctctgaaacctcgagtaatgattatttattattataattaaaaactgaaaaaaa 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 842 taatttctctgaaacctcgagtaatgattatttattattataattaaaaactg-aaaaaa 900
Query: 1200 atccagttaacaaagaacaatcgtacctaaaagtgatattaatttaagtaacatttagtc 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atccagttaacaaagaacaatcgtacctaaaagtgatattaatttaagtaacatttagtc 960
Query: 1260 at 1261
||
Sbjct: 961 at 962
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,059
Number of extensions: 8429
Number of successful extensions: 8429
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8427
Number of HSP's successfully gapped: 1
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)