BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15041 (UTR included)
(1549 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B1A06 1407 0.0
>BF01020B1A06
Length = 735
Score = 1407 bits (710), Expect = 0.0
Identities = 722/726 (99%)
Strand = Plus / Plus
Query: 428 tgaaaagttggaatatttgtgttgcttaaattcaattctctttttgaagtctatttaata 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgaaaagttggaatatttgtgttgcttaaattcaattctctttttgaagtctatttaata 69
Query: 488 cctgaatactaagatgccgtcaaaacaaagaaaaattgctatgatgggatacagatccgt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cctgaatactaagatgccgtcaaaacaaagaaaaattgctatgatgggatacagatccgt 129
Query: 548 cggcaaatcgtcgcttattatacaatttgtagaagggcagttcgtggattcttatgaccc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cggcaaatcgtcgcttattatacaatttgtagaagggcagttcgtggattcttatgaccc 189
Query: 608 cacaatagaaaatacatttacaaaatttatccgattaaactccactgagtatgaagttaa 667
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 190 cacaatagaaaatacatttacaaaatttatcagattaaactccactgagtatgaagttaa 249
Query: 668 actagtagatacagctggtcaagatgagtacagcatctttcctctacaatacagtatgga 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 actagtagatacagctggtcaagatgagtacagcatctttcctctacaatacagtatgga 309
Query: 728 ttttcatggctatgtgttggtatactctataacatcaagcaagagttttcaaattgtaca 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttttcatggctatgtgttggtatactctataacatcaagcaagagttttcaaattgtaca 369
Query: 788 aataatatatgacaaactgttggatatggttggcaaaatacatgttcccatagtattggt 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aataatatatgacaaactgttggatatggttggcaaaatacatgttcccatagtattggt 429
Query: 848 tggcaataagacggatcttcatttggaaagaaagataagtactgaggaaggaaaaagatt 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tggcaataagacggatcttcatttggaaagaaagataagtactgaggaaggaaaaagatt 489
Query: 908 ggcagagaaatggaatgcggcctttgttgaaaccagcgcaaagagaaatgagtctgttac 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggcagagaaatggaatgcggcctttgttgaaaccagcgcaaagagaaatgagtctgttac 549
Query: 968 tgacatgttccatgcaatgctgtcagaaatagaaagatccgacggtcacatgcccgagaa 1027
||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 550 tgacatgttccatgcgatgctgtcggaaatagaaagatccgatggtcacatgcccgagaa 609
Query: 1028 gaatggatgtgttgtttcttaatgaataacttttgtggactatgtggcttatttatgctt 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaatggatgtgttgtttcttaatgaataacttttgtggactatgtggcttatttatgctt 669
Query: 1088 aagtgaattaagttataggtagtttgaacacagttatatatataactggcacatagcaac 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aagtgaattaagttataggtagtttgaacacagttatatatataactggcacatagcaac 729
Query: 1148 tgtctg 1153
||||||
Sbjct: 730 tgtctg 735
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,057
Number of extensions: 6572
Number of successful extensions: 6572
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6572
Number of HSP's successfully gapped: 1
Length of query: 1549
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1532
Effective length of database: 8,119,229
Effective search space: 12438658828
Effective search space used: 12438658828
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)