BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15043 (UTR included)
(2518 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3103_C1 841 0.0
BF14_194_C1 747 0.0
>BF14_3103_C1
Length = 1118
Score = 841 bits (424), Expect = 0.0
Identities = 451/463 (97%)
Strand = Plus / Plus
Query: 783 ggtggtcgtgagcatggcgtccctatcctgatctcggagctagaggctggcggacctgcc 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggtggtcgtgagcatggcgtccctatcctgatctcggagctagaggctggcggacctgcc 715
Query: 843 gcgctcacgggagacctctatgtaggggacgccatcctagctatcaacgatgttgacctc 902
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 716 gcgctcacgggagacctctatgtaggggacgccatcctagccatcaacgatgttgacctc 775
Query: 903 acacaggcttgtcataaagacgcggtggaggccctgcagagtgtgaagggcgactgtgct 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 acacaggcttgtcataaagacgcggtggaggccctgcagagtgtgaagggcgactgtgct 835
Query: 963 ctctgtgtacagttcatagccactgacgaggaggatcgactctcagacgacaactacagg 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ctctgtgtacagttcatagccactgacgaggaggatcgactctcagacgacaactacagg 895
Query: 1023 ttcgcgctgtatcctgaagaagacggtttcggagaggacggagaggaaggggatgcggcc 1082
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 896 ttcgcgctgtatcctgaagaagacggtttcggagacgacggagaggaaggggacgcggcc 955
Query: 1083 acgcccaccgcgcccaggacaccggactacacacgtagcgtgtcgtgtagtgaggacgag 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 acgcccaccgcgcccaggacaccggactacacacgtagcgtgtcgtgtagtgaggacgag 1015
Query: 1143 cacgacatggcggtgcagggcggcggcgaggcgggcgcggcgctggccggggcctcgtac 1202
|||||||||||||||| ||||||||| |||||||||||||||||| ||||||||
Sbjct: 1016 cacgacatggcggtgcnnnncggcggcganncgggcgcggcgctggccgnnncctcgtac 1075
Query: 1203 acggactacaacatcaacaacctctctatactggacatggacg 1245
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 acggactacaacatcaacaacctctctatactggacatggacg 1118
Score = 587 bits (296), Expect = e-167
Identities = 299/300 (99%)
Strand = Plus / Plus
Query: 484 aggccgagctcgtcgacatgcgagcggaattagttcaagctcgggctgcaggcgcttggc 543
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aggccgagcttgtcgacatgcgagcggaattagttcaagctcgggctgcaggcgcttggc 230
Query: 544 aggcgggcggggacgcggcgggtggtgcgcccgaggctgcgagggcgagggccgaagccg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aggcgggcggggacgcggcgggtggtgcgcccgaggctgcgagggcgagggccgaagccg 290
Query: 604 cacagcttgccagggaaaacgctgcgcttagagaaactgtgctcgcgttgcattcggaac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cacagcttgccagggaaaacgctgcgcttagagaaactgtgctcgcgttgcattcggaac 350
Query: 664 tgttcggagctagactagcaactaagtacctcgataaagaactagcgggtagaatacaac 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgttcggagctagactagcaactaagtacctcgataaagaactagcgggtagaatacaac 410
Query: 724 aattacaactgttaggtagtgaaatgcgcgccgagcttagggactcgttgtgggcccagg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aattacaactgttaggtagtgaaatgcgcgccgagcttagggactcgttgtgggcccagg 470
>BF14_194_C1
Length = 865
Score = 747 bits (377), Expect = 0.0
Identities = 377/377 (100%)
Strand = Plus / Plus
Query: 2142 ttcaattaattgtcagcaccgtttaatgtcgcacaataacaaaattaagagcgaaatcag 2201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaattaattgtcagcaccgtttaatgtcgcacaataacaaaattaagagcgaaatcag 60
Query: 2202 tagaagccgctttacgggccgcgatcagagaacgagccgccgcgccggtcgcttacacgt 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaagccgctttacgggccgcgatcagagaacgagccgccgcgccggtcgcttacacgt 120
Query: 2262 aatgttagctttaatatgtgagtttgttagctaaatcgcattttgtgtcgccgtggatta 2321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgttagctttaatatgtgagtttgttagctaaatcgcattttgtgtcgccgtggatta 180
Query: 2322 aaatacaatacagttagagtgattcctaccggacgatatttgacacttctaaaataagca 2381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatacaatacagttagagtgattcctaccggacgatatttgacacttctaaaataagca 240
Query: 2382 gagagacaaagtatcatatgcttaagtcgattagtcgattgctagttgcttcaattaata 2441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagagacaaagtatcatatgcttaagtcgattagtcgattgctagttgcttcaattaata 300
Query: 2442 aattaggttatcaaattattggttgtaaagtttccgaatataagtgtaaaataagtcgaa 2501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattaggttatcaaattattggttgtaaagtttccgaatataagtgtaaaataagtcgaa 360
Query: 2502 ccatcgtaatcatcggt 2518
|||||||||||||||||
Sbjct: 361 ccatcgtaatcatcggt 377
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,699
Number of extensions: 3451
Number of successful extensions: 3451
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3451
Number of HSP's successfully gapped: 3
Length of query: 2518
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2501
Effective length of database: 8,119,229
Effective search space: 20306191729
Effective search space used: 20306191729
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)