BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15054 (UTR included)
(1843 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1F03 1524 0.0
>BF01034B1F03
Length = 796
Score = 1524 bits (769), Expect = 0.0
Identities = 781/785 (99%)
Strand = Plus / Plus
Query: 453 ttgtttttttaattaattgaatggtgataatttattttaatataaaaaatggagtctccc 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ttgtttttttaattaattgaatggtgataatttattttaatataaaaaatggagtctccc 71
Query: 513 gaggaaatgtcccatgttatcacacaggaagaaaacaggacacttagtaatccggtgatt 572
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 72 gaggaaatgtcccatgttatcacacaggaagaaaacaggacacttagtaatccgatgatt 131
Query: 573 aatgatgaatatcaacagctacatgaagaagtaatggcaaatttccaaaagcctaatttg 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aatgatgaatatcaacagctacatgaagaagtaatggcaaatttccaaaagcctaatttg 191
Query: 633 cctaacataaatgttcccgagagaatcattatatgtttggatttgtgctatgatgcacaa 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cctaacataaatgttcccgagagaatcattatatgtttggatttgtgctatgatgcacaa 251
Query: 693 aattctctctttcgactggcagatggaacgacttacacaccaatcaacatgttgaagaga 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 252 aattctctctttcgactggcagatggaacgacttacacaccaatcaacatgttgaagcga 311
Query: 753 gttcttgacttctttatacattcaaaacatgcaatcaataagaggacagagtttgcatta 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gttcttgacttctttatacattcaaaacatgcaatcaataagaggacagagtttgcatta 371
Query: 813 tttgttttaaatgattcagatgttcaatacattcaaaactttaccaacaatattaaagat 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tttgttttaaatgattcagatgttcaatacattcaaaactttaccaacaatattaaagat 431
Query: 873 attattaatgctatagattacgttcaaccagaagagtgcacacaggaaacatttgatttt 932
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 432 attattaatgctatagattacgttcaaccagaagaatgcacacaggaaacatttgatttt 491
Query: 933 cacaaaatttttaagattctgaagcaggatatacaaatacctgaatacaaacaatcagaa 992
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cacaaaatttttaaaattctgaagcaggatatacaaatacctgaatacaaacaatcagaa 551
Query: 993 tgtattctaccacctccttatgtggttcgtatgattgtattgtataatcgctccaactgt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgtattctaccacctccttatgtggttcgtatgattgtattgtataatcgctccaactgt 611
Query: 1053 atacctgtcattcaacaggatgatccatattttaatatcttaaagaagcatttgttcttt 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 atacctgtcattcaacaggatgatccatattttaatatcttaaagaagcatttgttcttt 671
Query: 1113 tattttgatattttatatgcacatgaagatgactgtgctctctacaaatgtgaagaaatc 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tattttgatattttatatgcacatgaagatgactgtgctctctacaaatgtgaagaaatc 731
Query: 1173 tatgatgcactacaggacctggacaatggatattcttttgtttttgaagtctcaaaaaat 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tatgatgcactacaggacctggacaatggatattcttttgtttttgaagtctcaaaaaat 791
Query: 1233 gcaac 1237
|||||
Sbjct: 792 gcaac 796
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,260
Number of extensions: 5961
Number of successful extensions: 5961
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5959
Number of HSP's successfully gapped: 1
Length of query: 1843
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1826
Effective length of database: 8,119,229
Effective search space: 14825712154
Effective search space used: 14825712154
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)