BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15057 (UTR included)
(1717 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1729_C1 1560 0.0
>BF14_1729_C1
Length = 803
Score = 1560 bits (787), Expect = 0.0
Identities = 799/803 (99%)
Strand = Plus / Plus
Query: 428 taacctattcaataattataattctaataagtacagaaaggacaataaaaattgaattaa 487
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacctattcaataattataattgtaataagtacagaaaggacaataaaaattgaattaa 60
Query: 488 aaaaggttttaccatggactatcattacgaacaaactagtgaagttgaagctttagattc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaggttttaccatggactatcattacgaacaaactagtgaagttgaagctttagattc 120
Query: 548 catttattatggagatatgcaaattttacagacagagcctatgcacaagtttagtatacc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catttattatggagatatgcaaattttacagacagagcctatgcacaagtttagtatacc 180
Query: 608 aattaaatcagaggaatatgatgagggagagggtttagcatgtgaattagtcttcacata 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattaaatcagaggaatatgatgagggagagggtttagcatgtgaattagtcttcacata 240
Query: 668 cacaccaaaataccctgaagagttgccttcattagaaataaatacagaagaaagtttcga 727
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 cacaccaaaataccctgaagagttgccttcattagaaataaatacagatgaaagtttcga 300
Query: 728 tgaaattgtcgacaaaaacgaactttacaaacatcttatggaacaagctaatgagaatct 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaaattgtcgacaaaaacgaactttacaaacatcttatggaacaagctaatgagaatct 360
Query: 788 tggaatggtaatgatatttacgctagtgtcagctggacaagagtggctcaatgagaaatg 847
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggaatggtaatgatttttacactagtgtcagctggacaagagtggctcaatgagaaatg 420
Query: 848 ggatagtattaaaaaagacagagaagaagctgttctactgaagaaaaaggctgaagaaga 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggatagtattaaaaaagacagagaagaagctgttctactgaagaaaaaggctgaagaaga 480
Query: 908 ggcagagatgaaaagatttgaaggtaccagagttacggttgaatcattccttgcctggag 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcagagatgaaaagatttgaaggtaccagagttacggttgaatcattccttgcctggag 540
Query: 968 aaaacagtttgaaatagaaatgggtattccggctaagagggagaaagaaaacaaggacaa 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaacagtttgaaatagaaatgggtattccggctaagagggagaaagaaaacaaggacaa 600
Query: 1028 aaataagttaacaggaaaagaattatttatgagagacaccacactcaacgaatctgattt 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaataagttaacaggaaaagaattatttatgagagacaccacactcaacgaatctgattt 660
Query: 1088 gaaattccttgacgatggtgatgctgttaaagtggatgaatccctgttccaagatctcga 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaaattccttgacgatggtgatgctgttaaagtggatgaatccctgttccaagatctcga 720
Query: 1148 tgacctggatatatcagacgaagatgatgaagattacgtaccaggacagagtgaaactga 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgacctggatatatcagacgaagatgatgaagattacgtaccaggacagagtgaaactga 780
Query: 1208 cagtgactaacaaataatattta 1230
|||||||||||||||||||||||
Sbjct: 781 cagtgactaacaaataatattta 803
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,080
Number of extensions: 7429
Number of successful extensions: 7429
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7429
Number of HSP's successfully gapped: 1
Length of query: 1717
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1700
Effective length of database: 8,119,229
Effective search space: 13802689300
Effective search space used: 13802689300
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)