BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15058 (UTR included)
(1545 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1G02 1090 0.0
>BF01012A1G02
Length = 785
Score = 1090 bits (550), Expect = 0.0
Identities = 574/582 (98%)
Strand = Plus / Plus
Query: 448 gaattaatgatatgtgattactctatattcgtaaagtaatattttgttctaacatgggtc 507
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9 gaattaatgatatgtgattactctatattcgtaaactaatattttgttctaacatgggtc 68
Query: 508 ttttatccgatccagaatatgggtcggtaaaatgggtcagggtactaaagaaagtgcatt 567
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttttatcggatccagaatatgggtcggtaaaatgggtcagggtactaaagaaagtgcatt 128
Query: 568 cgcctctgtgttttattttttacgtttgtgctattggatggttttttatgttagcacaca 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 cgcctctgtgttttattttttacgtttgtgctattggatggttttttatgttagcacaca 188
Query: 628 gagaattcaataatgaaacttatttctcagagaatgctttattacccggtttagttacta 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gagaattcaataatgaaacttatttctcagagaatgctttattacccggtttagttacta 248
Query: 688 atgaatttgacgccgagtactcggcaaataagttttataaggaattcctccaagaattag 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atgaatttgacgccgagtactcggcaaataagttttataaggaattcctccaagaattag 308
Query: 748 aggataaatatgaagatagcgatgaaatgcccgtaccctggctggttggcaagatgtctc 807
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 309 aggataaatatgaagatagtgatgaaatgcctgtaccctggctggttggcaagatgtctc 368
Query: 808 agttagatctcgaagtctacactcacaattttacactgaactatcctctaggacatggac 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agttagatctcgaagtctacactcacaattttacactgaactatcctctaggacatggac 428
Query: 868 aggtttacaaaggaacaaatgtgtatggcattctaagagcacctcgaacttcttctttag 927
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 429 aggtttacaaaggaacaaatgtgtatggaattctaagagcacctcgaacttcttctttag 488
Query: 928 aggcattggtggtgaccgcaccttttcgttcattaaccagtcatcagaaaggaactgcag 987
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 489 aggcattagtggtgaccgcaccttttcgttcattatccagtcatcagaaaggaactgcag 548
Query: 988 ctggtataggattgatgctggcatttgcacagtttgctagac 1029
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 549 ctggtataggattgatgctagcatttgcacagtttgctagac 590
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,798
Number of extensions: 4454
Number of successful extensions: 4454
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4454
Number of HSP's successfully gapped: 1
Length of query: 1545
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1528
Effective length of database: 8,119,229
Effective search space: 12406181912
Effective search space used: 12406181912
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)