BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15078 (UTR included)
(1061 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1211_C1 541 e-154
>BF14_1211_C1
Length = 1255
Score = 541 bits (273), Expect = e-154
Identities = 279/281 (99%)
Strand = Plus / Plus
Query: 285 ttccagtggtctcatgaccagtctgagcgcgttcaagaccaacgtgggcgccggcatcgt 344
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 101 ttcctgtggtctcatgaccagtctgagcgcgttcaaaaccaacgtgggcgccggcatcgt 160
Query: 345 gaccctcatagtgaccatcggcttcatcaccgcggtcgtagctgacgtgatgctcatcac 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gaccctcatagtgaccatcggcttcatcaccgcggtcgtagctgacgtgatgctcatcac 220
Query: 405 caaggtgcaccgtatctaccgctccacgggcgcgtccctggcgaaggcccaggcggagtt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 caaggtgcaccgtatctaccgctccacgggcgcgtccctggcgaaggcccaggcggagtt 280
Query: 465 cacgtccgagatcctccgctcaccgcacgtccagggagccgccagcgaggtggccgccgc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cacgtccgagatcctccgctcaccgcacgtccagggagccgccagcgaggtggccgccgc 340
Query: 525 cgccgtcgcctccaggctcggagacaatagatactaggtga 565
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cgccgtcgcctccaggctcggagacaatagatactaggtga 381
Score = 285 bits (144), Expect = 7e-77
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 918 aggtgaaacagaaactgtcgcatttacagcggaagtgcaaaatgagtcaaaaaaaaaaac 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aggtgaaacagaaactgtcgcatttacagcggaagtgcaaaatgagtcaaaaaaaaaaac 435
Query: 978 taacttaaggcgcttttcttatatgtaattaatatacggtatcatcgttgtattggacat 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 taacttaaggcgcttttcttatatgtaattaatatacggtatcatcgttgtattggacat 495
Query: 1038 tgtattgagtagtcagagatttaa 1061
||||||||||||||||||||||||
Sbjct: 496 tgtattgagtagtcagagatttaa 519
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 176,098
Number of extensions: 4619
Number of successful extensions: 4619
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4619
Number of HSP's successfully gapped: 2
Length of query: 1061
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1044
Effective length of database: 8,119,229
Effective search space: 8476475076
Effective search space used: 8476475076
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)