BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15087 (UTR included)
(2581 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2E08 733 0.0
BF14_335_C2 172 2e-42
BF01043B1E03 127 1e-28
BF01031B2E06 103 1e-21
BF01055B2A04 101 5e-21
BF01017A1F03 80 2e-14
BF01037A2H12 76 3e-13
>BF01016B2E08
Length = 698
Score = 733 bits (370), Expect = 0.0
Identities = 376/378 (99%)
Strand = Plus / Plus
Query: 1203 cctaagaagtacgtacaaaatggcgtgcatatgcagaacgatatagacaagggtgttacg 1262
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 cctaagaagtacgtacaaaatggcgtgcatatgcacaacgatatagacaagggtgttacg 60
Query: 1263 gaacagccttacgacggacggacatacatgcaagtgaaatacctagactccaacgagatc 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacagccttacgacggacggacatacatgcaagtgaaatacctagactccaacgagatc 120
Query: 1323 aactggggggacacgaacacctacccgagtttcacgggaactgatagctttatacatata 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactggggggacacgaacacctacccgagtttcacgggaactgatagctttatacatata 180
Query: 1383 gatgacgaagagactatgaaaaggttgctgagctacaccctggacatcaacatccgtttc 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgacgaagagactatgaaaaggttgctgagctacaccctggacatcaacatccgtttc 240
Query: 1443 cgttccgtgtcctccaacggtctgttagtgtggagcggtcgggtcacacacacacacaca 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgttccgtgtcctccaacggtctgttagtgtggagcggtcgggtcacacacacacacaca 300
Query: 1503 gagaacaatatgaacacgaacacacacacaagcgacttcctttcattggctgtggaaaac 1562
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 gagaacaatatgaacacgaacacacacacgagcgacttcctttcattggctgtggaaaac 360
Query: 1563 tccgtgcttgtattcaga 1580
||||||||||||||||||
Sbjct: 361 tccgtgcttgtattcaga 378
>BF14_335_C2
Length = 1827
Score = 172 bits (87), Expect = 2e-42
Identities = 275/337 (81%), Gaps = 23/337 (6%)
Strand = Plus / Minus
Query: 1610 acatatttatgtattcggga-ttttaaagcgcgttgtgatgatagagcttacgattcctt 1668
|||||||| |||||||| || |||||||||||| | | | ||||||| |||| ||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 1669 gggaaaccaacatccctaaagaccataccatcaaggtcaacaaatattacgagctcacaa 1728
|| | ||||||||||| ||| ||||| |||||||||||||||| ||||| |||||||| |
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
Query: 1729 acgaactcactcgaaataggttcgtcgtgga-tttgtacgcggtagaagtgggagc---- 1783
| ||||||||||| | | |||||||| ||||||||||||||
Sbjct: 1157 ------------ggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagt 1110
Query: 1784 --gagaggtataacggctaaatctctctacaacctactaaaagacttaggcctgtccaga 1841
|||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||
Sbjct: 1109 gagagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccaga 1050
Query: 1842 actcacatcaattcgttcttggaacgtacttcgaaggcagccctagtaggttcttttcaa 1901
||| ||| || ||| ||||| ||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 1049 actaacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaa 990
Query: 1902 atatggttaggtagggagaggagcttggacagtggag 1938
|| ||||||| | ||||||||||||||| ||||||
Sbjct: 989 atttggttag---gagagaggagcttggacggtggag 956
>BF01043B1E03
Length = 830
Score = 127 bits (64), Expect = 1e-28
Identities = 138/162 (85%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 1777 tgggagcgagaggtataacggctaaatctctctacaacctactaaaagacttaggcctgt 1836
|||||| | |||||||||| ||| |||||||||||||||||| ||| |||| |||||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 1837 ccagaactcacatcaattcgttcttggaacgtacttcgaaggcagccctagtaggttctt 1896
|||||||| ||||||| || ||||||||||||||| | ||||||| || |||||| |
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcc---taggtttgt 320
Query: 1897 ttcaaatatggttaggtagggagaggagcttggacagtggag 1938
||||||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggacagtggag 362
>BF01031B2E06
Length = 707
Score = 103 bits (52), Expect = 1e-21
Identities = 118/140 (84%)
Strand = Plus / Plus
Query: 1743 aataggttcgtcgtggatttgtacgcggtagaagtgggagcgagaggtataacggctaaa 1802
||||||||||| | |||||||||||||||||||||||||||| | | ||| ||||||
Sbjct: 497 aataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaa 556
Query: 1803 tctctctacaacctactaaaagacttaggcctgtccagaactcacatcaattcgttcttg 1862
|||||| |||||||||||||| ||| |||||||||||| || ||||||| | | ||
Sbjct: 557 tctctccacaacctactaaaaaccttgggcctgtccagatctaacatcaaataatcttta 616
Query: 1863 gaacgtacttcgaaggcagc 1882
|||| |||||||||||||||
Sbjct: 617 gaacatacttcgaaggcagc 636
>BF01055B2A04
Length = 830
Score = 101 bits (51), Expect = 5e-21
Identities = 202/250 (80%), Gaps = 13/250 (5%)
Strand = Plus / Minus
Query: 1629 attttaaagcgcgttgtgatgatagagcttacgattccttgggaaaccaacatccctaaa 1688
||||| |||| |||||| | ||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 562 atttttaagctcgttgttttaatagagcttacgattccctggaaaaccaacatccccaaa 503
Query: 1689 gaccataccatcaaggtcaacaaatattacgagctcacaaacgaactcactcgaaatagg 1748
|||| | ||| | ||||||| | | ||| ||||||| |||||||||||| | |||||
Sbjct: 502 gaccgtgccaccgaggtcaata---agtacaagctcactaacgaactcactaggaataga 446
Query: 1749 ttcgtcgtggatttgtacgcggtagaagtgggagcgagaggtataacggctaaatctctc 1808
|||||||| | |||||| || ||| ||||| ||||||||| |||||| ||||
Sbjct: 445 ttcgtcgtaaacttgtac-------aattggaagcgaaaggtataacagctaaa--tctc 395
Query: 1809 tacaacctactaaaagacttaggcctgtccagaactcacatcaattcgttcttggaacgt 1868
|||||||||||||||||||| ||||||| | | ||| |||||| | ||||| ||||||
Sbjct: 394 tacaacctactaaaagacttgggcctgt-taaagatcaaatcaatccattcttagaacgt 336
Query: 1869 acttcgaagg 1878
||||||||||
Sbjct: 335 acttcgaagg 326
>BF01017A1F03
Length = 782
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1761 ttgtacgcggtagaagtgggagcgagaggtataacggctaaatctctc 1808
|||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 54 ttgtacgcggtagaagcgggagcgagagatataacggctaaatctctc 101
>BF01037A2H12
Length = 773
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 1759 atttgtacgcggtagaagtgggagcgagaggtataacggctaaatctctctacaacctac 1818
||||||||| |||| |||| |||||||||||||||| || ||||||||| ||||||| |
Sbjct: 672 atttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgacaacctgc 731
Query: 1819 taaaagactt 1828
||||||||||
Sbjct: 732 taaaagactt 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,052
Number of extensions: 6966
Number of successful extensions: 6966
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 6957
Number of HSP's successfully gapped: 8
Length of query: 2581
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2564
Effective length of database: 8,119,229
Effective search space: 20817703156
Effective search space used: 20817703156
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)