BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15096 (UTR included)
(2191 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3248_C1 1473 0.0
BF01021A1A08 357 5e-98
>BF14_3248_C1
Length = 779
Score = 1473 bits (743), Expect = 0.0
Identities = 770/779 (98%)
Strand = Plus / Plus
Query: 421 attgcaggatgtaaacacattttacatttcttgtatttgttaccaatacctgtaaactac 480
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 1 attgcaggatgtaaacacattttagatttcttgtatttgttaccaatacctataaactac 60
Query: 481 ggtttagatttaggaccaaaatggatcaagaaactgctaaaaagctgttagtggaaggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttagatttaggaccaaaatggatcaagaaactgctaaaaagctgttagtggaaggag 120
Query: 541 gaacttttatatttctcggagtgccccaagagactcaatttggaattgatatgcaatgtt 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaacttttatatttcttggagtgccccaagagactcaatttggaattgatatgcaatgtt 180
Query: 601 ggaataccgatgaggattttcgtggaataaaaatgattccgccgggccttcactatgttc 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 ggaataccgatgaggattttcgtggaataaaaatgattccgccgggccttcattatgttc 240
Query: 661 attatgctgcagtgaataaagacacaggcgatgtttctcctaggtcagggtttatgcact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attatgctgcagtgaataaagacacaggcgatgtttctcctaggtcagggtttatgcact 300
Query: 721 attttgataaaaaagaatttttggtaaaaatgtgggataaacatttggaagatattagta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attttgataaaaaagaatttttggtaaaaatgtgggataaacatttggaagatattagta 360
Query: 781 gagaagaaataagtgaagaaagtattcagcgtttaagggagaatttacttaatatagata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagaagaaataagtgaagaaagtattcagcgtttaagggagaatttacttaatatagata 420
Query: 841 aacatttggccccatacccatatgaaatatggcagaaatggaaacttttatcttcacaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacatttggccccatacccatatgaaatatggcagaaatggaaacttttatcttcacaaa 480
Query: 901 tcaatgctgatctagcaaaaaaactatcccctgaaactggcttgataagatcatcagtgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaatgctgatctagcaaaaaaactatcccctgaaactggcttgataagatcatcagtgg 540
Query: 961 aactgctctcaacaagtgacgctgatagacctcgaggtgttaaagtaactgaaaattcag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aactgctctcaacaagtgacgctgatagacctcgaggtgttaaagtaactgaaaattcag 600
Query: 1021 aggtttcaaccatcactgaaaataatgatgaaatttcaaatcccagtcaatcaggtctca 1080
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 aggtatcaaccatcactgaaaataatgatgaaatttcaactcccagtcaatcaggtctca 660
Query: 1081 aaaggacgagaagatccacacaacaagaaaaagaagaagctatgttgccaaacttaaaac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaaggacgagaagatccacacaacaagaaaaagaagaagctatgttgccaaacttaaaac 720
Query: 1141 ctgcacctggaatgtcaatgagatttacagaaatacccaaagacaaatacccacctggt 1199
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 721 ctgcacctggaatgtcaatgagatttacagaaatacctaaagacaaatacccacctggt 779
>BF01021A1A08
Length = 768
Score = 357 bits (180), Expect = 5e-98
Identities = 202/208 (97%), Gaps = 1/208 (0%)
Strand = Plus / Minus
Query: 1915 ttttttataactagttcttgagaatataactaaggtttgctactcattactatctcatag 1974
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 768 ttttttataactagttcttgagaatataactgaggtttgctactcattactatctcatag 709
Query: 1975 agttagcctactaaatggttacttaattagaagcaatacaccgtcaaaatgttcccttat 2034
|||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 708 agttagcctactaaatagttacttaattaaaagcaatacaccgtc-aaatgttcccttat 650
Query: 2035 ttcttctttttcattactttgttcaaagacttatttttattttgtttctcgaactttgca 2094
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 649 ttcttctttttcattactttgttcaaagacttatttttattttgtttctcaaactttgca 590
Query: 2095 ttctttactgttacagctgattctgaaa 2122
||||||||||| ||||||||||||||||
Sbjct: 589 ttctttactgtaacagctgattctgaaa 562
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 337,360
Number of extensions: 7129
Number of successful extensions: 7129
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7126
Number of HSP's successfully gapped: 2
Length of query: 2191
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2174
Effective length of database: 8,119,229
Effective search space: 17651203846
Effective search space used: 17651203846
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)