BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15101 (UTR included)
(2332 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2H08 894 0.0
>BF01020A2H08
Length = 481
Score = 894 bits (451), Expect = 0.0
Identities = 473/481 (98%)
Strand = Plus / Plus
Query: 1033 gcaatgttaaatacttcaaacacaacgacatgaaggatttagaaaggttgctcgaggagg 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaatgttaaatacttcaaacacaacgacatgaaggatttagaaaggttgctcgaggagg 60
Query: 1093 gcgtccagaaaaaggaattgcatcctaagagacgtgcgttcctgatcgttgaagcaatat 1152
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 61 gcgtccagaaaaaggaattgcatcctaagagacgtgccttcctgatcgttgaagctatat 120
Query: 1153 actttaattctggtaaaatgtgccctttgaggaaggctgtggaactggcgaggaggtaca 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actttaattctggtaaaatgtgccctttgaggaaggctgtggaactggcgaggaggtaca 180
Query: 1213 aattaagaatcatgctggacgagagcttgagcattggtgtaataggtaagaacggccgcg 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattaagaatcatgctggacgagagcttgagcattggtgtaataggtaagaacggccgcg 240
Query: 1273 gtctgaccgaacacttgaacgtgcctcgtgatgaagtggatctcatcatgggctcgctgg 1332
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 gtctgaccgaacacttgaacgtgcctcgtgatgaagtggatctgatcatgggctcgctgg 300
Query: 1333 aacactcgttcgccaccatcggcggcttctgcgctgggacgcacttcatcgtagaacacc 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacactcgttcgccaccatcggcggcttctgcgctgggacgcacttcatcgtagaacacc 360
Query: 1393 aaaggctatcaggcctagggtactgtttcagcgcgtcccttccacctatgctaacagagg 1452
||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 361 aaaggctgtcaggcctagggtactgtttcaacgcgtcccttccaccgatgctaacagagg 420
Query: 1453 cggccatcaccgccctggatatactcgagtcccaaccagtcgtggttaaggagttggacg 1512
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggccatcaccgccctgganntactcgagtcccaaccagtcgtggttaaggagttggacg 480
Query: 1513 a 1513
|
Sbjct: 481 a 481
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 301,857
Number of extensions: 6988
Number of successful extensions: 6988
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6988
Number of HSP's successfully gapped: 1
Length of query: 2332
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2315
Effective length of database: 8,119,229
Effective search space: 18796015135
Effective search space used: 18796015135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)