BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15107 (UTR included)
(2887 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A2H03 1326 0.0
>BF01034A2H03
Length = 713
Score = 1326 bits (669), Expect = 0.0
Identities = 702/713 (98%)
Strand = Plus / Plus
Query: 1287 aagactgggctggtggggaggttcgctgtcagtgtgattgatgacctagtggtcattcat 1346
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagacggggctggtggggaggttcgctgtcagtgtgattgatgacctagtggtcattcat 60
Query: 1347 caccagtccagtcagacctcactcatattcgacataatggaggaagcgaagccagaaaac 1406
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 61 caccagtccagtcagacctcactcatattcgacataatggaggaagcaaagccagagaac 120
Query: 1407 aacacagtagtccacaaacctatagtacagggtatatcaatgagaccagctgtcgttgat 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacacagtagtccacaaacctatagtacagggtatatcaatgagaccagctgtcgttgat 180
Query: 1467 gaacagacctgtccgatgtactccggtaactgggtggtgtttcaaccacattatgtgatc 1526
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacagacctgtccgatgtactccggtaactgggtggtgtttcaaccacattatgtgatt 240
Query: 1527 gatgccaggctcggttgtctgtggaggctggagctcaacttagctggcctggcgcatgag 1586
|||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 241 gatgccaggctcggctgtctgtggaggctggagctcaacttacctggtctggcgcatgag 300
Query: 1587 gttccaaaggaggatatctccaacatagtcggtgttctgttgagaaggaacaacagcaag 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttccaaaggaggatatctccaacatagtcggtgttctgttgagaaggaacaacagcaag 360
Query: 1647 gaaaccatctacaggatcctgaaccagctcgtggaacacgctgggacctacctcatggaa 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaaccatctacaggatcctgaaccagctcgtggaacacgctgggacctacctcatggaa 420
Query: 1707 ctcactcactgctttgatgagatcaacgctgtctatagacgatgggcggatttggaggtg 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcactcactgctttgatgagatcaacgctgtctatagacgatgggcggatttggaggtg 480
Query: 1767 gcccgcaacacggcaggctgtccgccgcccgcccagggacacttccccgccctcgtgtcg 1826
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctcgcaacacggcaggctgcccgccgcccgcccagggacacttccccgccctcgtgtcg 540
Query: 1827 caggctgacatgtgcacacacgtcctgtacaaacactcccacacactactagtgcaggtg 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caggctgacatgtgcacacacgtcctgtacaaacactcccacacactactagtgcaggtg 600
Query: 1887 gtgacggcatacttgtcgtctctctcccgttacgagctggtggtgcagcacgcggtgtgc 1946
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgacggcatacttgtcgtctctgtcccgttacgagctggtggtgcagcacgcggtgtgc 660
Query: 1947 gagctggtggtgcggtcgctggtgagggctggcgagggcgggcggctgcgggc 1999
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagctggtggtgaggtcgctggtgagggctggcgagggcgggcggctgcgggc 713
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 338,313
Number of extensions: 6841
Number of successful extensions: 6841
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6839
Number of HSP's successfully gapped: 1
Length of query: 2887
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2870
Effective length of database: 8,119,229
Effective search space: 23302187230
Effective search space used: 23302187230
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)